SARS_CoV_2 mutation literature information.


  High-Density Amplicon Sequencing Identifies Community Spread and Ongoing Evolution of SARS-CoV-2 in the Southern United States.
 PMID: 33113345       2020       Cell reports
Result: Of these, n = 79 (57%) carried the S protein D614G SNV, a mutation implicated in higher pathogenicity of the virus.
Result: Samples carrying the D614G SNV had higher SARS-CoV-2 genome loads as measured by CDC N3-primer directed real-time qRT-PCR for SARS-CoV-2 (p <= 0.002 by Wilcoxon signed rank test).
Discussion: Given the increasing abundance of D614G SNVs, further research into its role in pathogenicity and clinical outcomes is warranted.


  Massive dissemination of a SARS-CoV-2 Spike Y839 variant in Portugal.
 PMID: 33131453       2020       Emerging microbes & infections
8Discussion: In this hypothesis, th
Introduction: A variant carrying the Spike D614G mutation stands out as a remarkable example, as it became dominant worldwide during the first months of the pandemic with recent studies suggesting that the G614 variant might be linked to an increased transmissibility but not pathogenicity.
Introduction: After the globally dispersed Spike D614G mutation, this is the first study reporting the superspread of a Spike variant with a tremendous epidemiological impact at country level.


  [The virology of SARS-CoV-2].
 PMID: 33132795       2020       Der Pneumologe
3Introduction: Zu vorherrschenden Linien entwickelten sich dabei solche SARS-CoV-2-Viren, die auf den prominent aus dem Virus herausragenden ,,S spikes"" die Mutation D614G tragen."
Abstract: The D614G mutation in the S spikes seems to cause a higher infectiosity.
Introduction: Fur D614G wird aktuell keine Auswirkung auf Diagnostik, Impfstoff- oder DAA-Wirksamkeit befurchtet.


  SARS-CoV-2 spike D614G variant confers enhanced replication and transmissibility.
 PMID: 33140052       2020       bioRxiv
Abstract: During the evolution of SARS-CoV-2 in humans a D614G substitution in the spike (S) protein emerged and became the predominant circulating variant (S-614G) of the COVID-19 pandemic 1 .
Introduction: S-D614G is a protein variant containing a substitution in the S protein outside of the RBD and is thought to cause a conformational change.
Introduction: The data show that the S-D614G substitution confers increased binding to the hACE2 receptor and increased replication in primary human airway epithelial cultures.


  [The virology of SARS-CoV-2].
 PMID: 33144890       2020       Der Gastroenterologe
Abstract: The D614G mutation in the S spikes seems to cause a higher infectiousness.
Introduction: Fur D614G wird aktuell keine Auswirkung auf Diagnostik, Impfstoff- oder DAA-Wirksamkeit befurchtet.
Introduction: Zur vorherrschenden Linie entwickelten sich dabei solche SARS-CoV-2-Viren, die auf den prominent aus dem Virus herausragenden S-Spikes die Mutation D614G tragen.


  New Pathways of Mutational Change in SARS-CoV-2 Proteomes Involve Regions of Intrinsic Disorder Important for Virus Replication and Release.
 PMID: 33149541       2020       Evolutionary bioinformatics online
Abstract: Mutation entropy decreased between March and April of 2020 after steady increases at several sites, including the D614G mutation site of the spike (S) protein that was previously found associated with higher case fatality rates and at sites of the NSP12 polymerase and the NSP13 helicase proteins.
Discussion: (1) S-protein: As previously reported, our research exploration reveals the active fixation of the D614G mutation of the S-protein of the spike, which we also find has coordinated entropic trends associated with the P323L mutation of the NSP12


  SARS-CoV-2 spread across the Colombian-Venezuelan border.
 PMID: 33157300       2020       Infection, genetics and evolution
8Discussion: Additionally, the presence of substitution D614G in the spike protein of the three viruses from patients residing in the current hotspots of COVID-19 in Venezuela may correlate with the reported increased infectivity observed in SARS-CoV-2-infected patients in the state of Zulia ("""")."
Abstract: We observed a point mutation in the Spike protein gene (D614G substitution), previously reported to be associated with increased infectivity, in all three Venezuelan genomes.
Result: The three Venezuelan genomes carried a G-to-A point mutation at position 23,403 resulting in a D614G substitution in the spike (S) protein.


  The Progression of SARS Coronavirus 2 (SARS-CoV2): Mutation in the Receptor Binding Domain of Spike Gene.
 PMID: 33163249       2020       Immune network
5Result: aspartic acid 614 codon ""GAT"" (reference sequence) was substituted by glycine 614 codon ""GGT"" (D614G) by chromatographic DNA sequencing result."
Result: DNA sequencing of the S gene cDNA revealed three mutations in addition to the known D614G mutation.
Result: Interestingly, the known mutation site D614G residue including three novel mutation sites are conserved between severe acute respiratory syndrome (SARS) and SARS-CoV2 in.


  Genomic exploration light on multiple origin with potential parsimony-informative sites of the severe acute respiratory syndrome coronavirus 2 in Bangladesh.
 PMID: 33163695       2020       Gene reports
Abstract: Genome-wide annotations revealed 256 mutations, of which 10 were novel (NSP3, RdRp, Spike) in Bangladeshi strains where I120F(NSP2), P323L(RdRp), D614G (Spike), R203K, G204R(N) are the most prominent.
Discussion: Among the mutations, the most frequent 2 mutations were D614G (Spike protein) and P323L (NSP12).
Discussion: in 2020 suggested that heavy alteration in the glycosylated  PMID: 33166683       2020       Infection, genetics and evolution
Discu
Discussion: D614G mutants began expanding in Europe and rapidly became dominant species.
Discussion: All of the evaluated samples in their report have been isolated in the first three months of 2020, while our first D614G mutant isolated in June.



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