literature

SARS_CoV_2 mutation literature information.

COVID-19 CG enables SARS-CoV-2 mutation and lineage tracking by locations and dates of interest.

PMID: 33620031 2021 eLife

Result: We used COVID-19 CG to detect other SNVs that could impact the use of this primer pair, discovering that there are SARS-CoV-2 variants in several countries with a different C29144T mutation at the very 3' end of the same NIID_2019-nCoV_N_F2 primer (Figure 3A).

Phylogeography of SARS-CoV-2 pandemic in Spain: a story of multiple introductions, micro-geographic stratification, founder effects, and super-spreaders.

PMID: 32935498 2020 Zoological research

Result: The most frequent haplogroups in Spain were A2a5 (n=354; 38.4% of Spanish haplotypes; diagnostic variants: C241T-C3037T-C14408T-A20268G-A23403G), A2a4 (n=72; 7.8%; diagnostic variants: C241T-C3037T-C14408T-A23403G plus characteristic MNP: GGG28881AAC), A2a10 (n=26; 2.8%; diagnostic variants: C241T-C3037T-C14408T-A23403G-C29144T), B3a (n=278; 30.2%; diagnostic variants: C8782T-

PMID: 33093050 2020 Microbiology resource announcements

Table: C29144T

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