SARS_CoV_2 mutation literature information.


  Long-Term Evolution of SARS-CoV-2 in an Immunocompromised Patient with Non-Hodgkin Lymphoma.
 PMID: 34319130       2021       mSphere
Abstract: Among the 15 single-nucleotide polymorphisms (SNP
Table: A222V
Discussion: A222V is also predicted to be located within one of the epitopes recognized by unexposed humans.


  Mutational analysis in international isolates and drug repurposing against SARS-CoV-2 spike protein: molecular docking and simulation approach.
 PMID: 34307771       2021       Virusdisease
Table: A222V


  Rapid, inexpensive methods for exploring SARS CoV-2 D614G mutation.
 PMID: 34307051       2021       Meta gene
Discussion: Other common mutations in the spike (S) protein, including A222V (C22227T), L81S (C21614T), and S477N (G22992A), are co-occurred with D614G in 100,401 sequences (21.8%), 45,943 sequences (10%) and 23,426 sequences (5.1%), respectively (Covid19 CG data: https://covidcg.org/?tab=group).


  Ongoing global and regional adaptive evolution of SARS-CoV-2.
 PMID: 34292871       2021       Proc Natl Acad Sci U S A
Figure: Black nodes correspond to key amino acid substitutions S L18F, S A222V, S S477N, S N501Y, S D614G, S P681H, S T716I, N R203K, and N G204R.


  Characterization of a Novel ACE2-Based Therapeutic with Enhanced Rather than Reduced Activity against SARS-CoV-2 Variants.
 PMID: 34287040       2021       Journal of virology
Introduction: The variants A222V (clade 20A.EU1) and S477N (clade 20A.EU2) emerged in the summer of 2020 in Spain and have rapidly shown diffusion within Europe.


  Evolutionary Tracking of SARS-CoV-2 Genetic Variants Highlights an Intricate Balance of Stabilizing and Destabilizing Mutations.
 PMID: 34281387       2021       mBio
Abstract: We recorded persistence of D614G, S477N, A222V, and V1176F variants and a global expansion of the PANGOLIN variant B.1.
Result: Structural analysis of double (D614G + S477N; D614G + A222V) and triple (D614G + S477N + A222V) mutation patterns in the S protein indicated DeltaDeltaG values of 0.228, 0.195 and 0.129, respectively (Table 3).
Table: A222V


  Updated SARS-CoV-2 single nucleotide variants and mortality association.
 PMID: 34245452       2021       Journal of medical virology
Figure: (A) S:A222V, (B) S:L18F, (C) ORF10:V30F, (D) N:A220V, (E) nsp7:L71F, (F) nsp14:A320V, (G) S:V1176F, (H) Ratios of nonsynonymous SNVs in the whole region or IDR of proteins, S, ORF1ab, and ORF3a, (I) Hydrophobic scores before (REF) and after alternations (ALT) of nonsynonymous SNVs in the IDRs of proteins, S, ORF1ab, and ORF3a.
Discussion: For e


  The Antigenicity of Epidemic SARS-CoV-2 Variants in the United Kingdom.
 PMID: 34220844       2021       Frontiers in immunology
Discussion: D614G+L18F+A222V and D614G+A222V were the main epidemic variants before the emergence of VOC-202012/01.
Discussion: L18F and A222V are typical mutations of the B.1.177 lineage.
Discussion: Both the D614G+L18F+A222V and D614G+A222V variants showed increased sensitivity to convalescent sera and sera elicited by inactivated-virus vaccines, which may be caused by the A222V mutation.


  Design of a companion bioinformatic tool to detect the emergence and geographical distribution of SARS-CoV-2 Spike protein genetic variants.
 PMID: 33380328       2020       Journal of translational medicine
Result: Next, there are a few variants with a frequency of 2-7% that are slowly rising in the viral populations, namely S477N, Q613H and A222V.



Browser Board

 Co-occurred Entities




   Filtrator