Result: Calculated by Codeml software using Naive NEB and Bayes Empirical Bayes models, seven positive selection sites of alpha-9 HPV E6 were detected, there were D32E of HPV-16 E6, K35N, K93N, R145I of HPV-33 E6, K93R of HPV-52 E6, K93N, R145K of HPV-58 E6.
Result: In HPV-16 E6, I34R, L35V, R62I, P66A and L90V all located in beta-fold, E120
Prevalence and distribution of human papillomavirus (HPV) in Luoyang city of Henan province during 2015-2021 and the genetic variability of HPV16 and 52.
Result: The three most prevalent nucleotide substitutions were T178G (D32E) (191/298, 64.1%) in the E6 gene and A647G (N29S) (195/298, 65.4%) and T846C (192/298, 64.4%) in the E7 gene, which are specific to the A4 (Asian) sublineage.
Discussion: It has been reported that the prevalence of both non-synonymous substitutions D32E and N29S
Discussion: Our results showed that the oncogenicity of E6 D32E and E7 N29S variations was associated with the development of cervical cancer.
Genetic variability and functional implication of HPV16 from cervical intraepithelial neoplasia in Shanghai women.
Abstract: Amino acid substitutions (D32N/E, E36Q, H85Y, and E120D in E6 and N29H/S and R77C in E7) were predicted to have an effect on conserved structural and functional residues, and five amino acid substitutions (H85Y, E36Q, I34L, and D32E in E6; R77C in E7) would potentially change the secondary structure.
Phylogeny and polymorphism in the E6 and E7 of human papillomavirus: alpha-9 (HPV16, 31, 33, 52, 58), alpha-5 (HPV51), alpha-6 (HPV53, 66), alpha-7 (HPV18, 39, 59, 68) and alpha-10 (HPV6, 44) in women from Shanghai.
Abstract: However, T7220G (D32E) variation in HPV16 E6 and A7689G (N29S) in HPV16 E7 increased the incidence of HSIL compared to the <HSIL group (P = 0.036 and 0.022).
Distribution of human papilloma virus type 16 E6/E7 gene mutation in cervical precancer or cancer: A case control study in Guizhou Province, China.
Abstract: D32E/M28V/L94P mutation was higher in the cervical cancer and precancer compared with the prototype.
Abstract: HPV-16 E6/E7 genetic variations, such as D32E/M28V/L94P, are more prevalent in cervical cancer or precancer than those in the controls.
Abstract: Mutations were simultaneously detected at the E6-D32E (T96A) and E7-M28V (A82G)/L94P ( PMID: 17429529
2007
Zhonghua shi yan he lin chuang bing du xue za zhi
Abstract: D32E/N29S mutation rate was 38.9% (28/72), the detection rate increased with the severity of cervical lesions (P < 0.05).
Abstract: A mutation, E6-D32E (T96G) coincided with a specific type of E7 mutation, N29S (A86G).
Abstract: CONCLUSION: HPV 16 was the most common type in women with cervical lesions in Beijing, D32E/N29S variant associated with the cervical lesions.