Abstract: Among the A1 viruses, an association of variants in the
E5 (
Y44L,
I65V),
E6 (
L83V) genes and
LCR:
C7577T with
SCC, with combined Odd's ratio (95% CI) of 20.5(4.61-91.25) was observed.
Result: The co-existence of
LCR:
C7577T,
E5:
A3979C,
A4042G and
E6:
T350G variants were found in 10 A1 haplotypes or nodes (E-16, E-18, E-19, E-22, E-26, E-28, E-37, E-38, E-41 and E-42), majority of which were case specific or overrepresented among case