HIV mutation literature information.


  Cyclophilin A promotes HIV-1 reverse transcription but its effect on transduction correlates best with its effect on nuclear entry of viral cDNA.
 PMID: 24479545       2014       Retrovirology
Introduction: In addition, N74D and A105T render WT HIV-1 dependent on CypA-CA binding in H9 and HeLa cells, host cells that do not otherwise require CypA for WT HIV-1 replication.
Introduction: Interestingly, CA mutations N74D and A105T have no effect on the CA-CypA interaction, but, when encoded in cis, either mutant will rescue the infectivity defect of the A92E mutant.


  HIV-1 evades innate immune recognition through specific cofactor recruitment.
 PMID: 24196705       2013       Nature
Abstract: Here we show that HIV-1 capsid mutants N74D and P90A, which are impaired for interaction with cofactors cleavage and polyadenylation specificity factor subunit 6 (CPSF6) and cyclophilins (Nup358 and CypA), respectively, cannot replicate in primary human monocyte-derived macrophages because they trigger innate sensors leading to nuclear translocation of NF-kappaB and IRF3, the production of soluble type 1 IFN and induction of an antiviral state.
Introduction: Given that CA mutation N74D prevents recruitment of CPSF6 we hypothesized that CPSF6 depletion would induce WT HIV-1 to trigger IFN responses in MDM.
Introduction: HIV-1 capsid (CA) mutant N74D cannot recruit CPSF6 and is insens


  The V86M mutation in HIV-1 capsid confers resistance to TRIM5alpha by abrogation of cyclophilin A-dependent restriction and enhancement of viral nuclear import.
 PMID: 23448277       2013       Retrovirology
Discussion: Indeed, restriction of HIV-1 by CPSF6-358, a truncated form of the RNA processing factor, cleavage and polyadenylation specific factor 6 (CPSF6), is counteracted by the mutation N74D in CA.


  Differential effects of human immunodeficiency virus type 1 capsid and cellular factors nucleoporin 153 and LEDGF/p75 on the efficiency and specificity of viral DNA integration.
 PMID: 23097450       2013       Journal of virology
Abstract: Here, we show that CA mutations, which include the substitution of Asp for Asn74 (N74D), significantly reduce the dependency of HIV-1 on LEDGF/p75 during infection and that this difference correlates with the efficiency of viral DNA integration.
Abstract: The distribution of integration sites mapped by Illumina sequencing confirms that the N74D mutation reduces integration into gene-rich regions of chromosomes and gene bodies and reveals previously unrecognized roles for NUP153 (another HIV-1 cofactor implicated in viral nuclear import) and LEDGF/p75 in the targeting of the viral preintegration complex to gene-dense regions of chromatin.


  Human immunodeficiency virus type 1 capsid mutation N74D alters cyclophilin A dependence and impairs macrophage infection.
 PMID: 22301145       2012       Journal of virology
Abstract: HIV-1 acquires resistance to CPSF6-358 through the N74D mutation of the capsid (CA), which alters its nuclear entry pathway.
Abstract: Here we show that compared to wild-type (WT) HIV-1, N74D HIV-1 is more sensitive to cyclosporine, has increased sensitivity to nevirapine, and is impaired in macrophage infection prior to reverse transcription.
Abstract: Overall, our data indicate that N74D HIV-1 replication in transformed cells requires cyclophilin A but is dependent on other interactions in macrophages.


  HIV-1 capsid-targeting domain of cleavage and polyadenylation specificity factor 6.
 PMID: 22301135       2012       Journal of virology
Abstract: Fusion of CPSF6 residues 301 to 358 to rhesus TRIM5alpha is also sufficient to restrict wild-type but not N74D HIV-1.
Abstract: HIV-1 acquires resistance to CPSF6-358 through an N74D mutation of CA that impairs binding of the antiviral factor.


  Mutations affecting interaction of integrase with TNPO3 do not prevent HIV-1 cDNA nuclear import.
 PMID: 22176773       2011       Retrovirology
Discussion: Recently, HIV-1 CA mutant N74D was shown to escape replication restriction observed upon TNPO3 depletion.


  HIV-1 capsid-cyclophilin interactions determine nuclear import pathway, integration targeting and replication efficiency.
 PMID: 22174692       2011       PLoS pathogens
Result: Finally, we studied the HIV-1 CA mutant N74D, which is reported to be less sensitive to Nup358 or TRN-SR2 depletion (Figure 3A).
Result: For wild type HIV-1 this density was 15 transcription units/MB, whereas for CA mutants N57A or N74D the density was reduced to what is expected for random integration (7-9 transcription units/MB) (Figure 4A and Figure S7).
Result: HIV-1 CA


  Transportin 3 promotes a nuclear maturation step required for efficient HIV-1 integration.
 PMID: 21901095       2011       PLoS pathogens
Abstract: Depletion of Tnp3 results in a re-distribution of HIV-1 capsid proteins between nucleus and cytoplasm however HIV-1 bearing the N74D mutation in capsid, which is insensitive to Tnp3 depletion, does not show nucleocytoplasmic redistribution of capsid proteins.
Figure: (C) Control (Scr) and Tnp3 KD HeLa cells were infected with the N74D mutant vector and analyzed by flow cytometry 24 hours later; mean values +- SD of three independent experiments are shown.
Figure: Virus input was normalized for infectivity in HeLa cells, hence the higher amount of N74D CA detected at the 6h time point.


  The requirement for nucleoporin NUP153 during human immunodeficiency virus type 1 infection is determined by the viral capsid.
 PMID: 21593146       2011       Journal of virology
Abstract: Two capsid missense mutant viruses, N74D and P90A, were largely insensitive to NUP153 depletion, as was wild-type HIV-1 when cyclophilin A was depleted simultaneously or when infection was conducted in the presence of cyclosporine A.



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