HIV mutation literature information.


  Clinical significance of HIV reverse-transcriptase inhibitor-resistance mutations.
 PMID: 21449841       2011       Future microbiology
Abstract: Several large-scale HIV-1 genotypic analyses have revealed that the most prevalent nucleos(t)ide analog RT inhibitor (NRTI)-resistance mutation is M184V/I followed by a series of thymidine analog-associated mutations: M41L, D67N, K70R, L210W, T215Y/F and K219Q/E.


  Thymidine analogue excision and discrimination modulated by mutational complexes including single amino acid deletions of Asp-67 or Thr-69 in HIV-1 reverse transcriptase.
 PMID: 21504903       2011       The Journal of biological chemistry
Abstract: Here, we show that the complex Delta67/T69G/K70R enhances ATP-dependent phosphorolytic activity on primers terminated with 3'-azido-3'-deoxythymidine (AZT) or 2',3'-didehydro-2',3'-dideoxythymidine (d4T) both in the presence or absence of TAMs.
Abstract: Molecular dynamics studies based on models of wild-type HIV-1 RT and mutant Delta69, Delta67/T69G/K70R, and D67N/K70R RTs support a relevant role for Lys/Arg-70 in the excision reaction.
Abstract: The deletion of Asp-67 together with mutations T69G and K70R (Delta67 complex) are usually associated with thymidine analog resistance mutations


  High prevalence of HIV-1 drug resistance among patients on first-line antiretroviral treatment in Lome, Togo.
 PMID: 21663632       2011       Journal of the International AIDS Society
Result: Two patients had virus mutations indicative of the TAM-1 profile (M41L, L210W, T215S), and two of the TAM-2 profile (D67N, K70R, T215F, K219Q/R/E).
Table: K70R


  Genotypic resistance at viral rebound among patients who received lopinavir/ritonavir-based or efavirenz-based first antiretroviral therapy in South Africa.
 PMID: 21694608       2011       Journal of acquired immune deficiency syndromes (1999)
Result: Four participants had at least one thymidine-associated mutation (TAM) - two recipients of ZDV+ddI had D67N + K70R, another ZDV+ddI recipient had K70R alone.
Result: Of the 32 individuals who never received EFV, 6 (18.8%, CI: 7.2-36.4%) had NRTI-associated mutations; five had M184V and one with K70R.


  Selection of HIV resistance associated with antiretroviral therapy initiated due to pregnancy and suspended postpartum.
 PMID: 21765365       2011       Journal of acquired immune deficiency syndromes (1999)
Method: An OLA was performed on all amplicons derived from plasma and PBMC using probes that detect mutations
Result: In addition, OLA detected 4 resistance mutations in 4 women that were not detected by sequencing, including the mutations encoding K103N, Y181C, M184V, and K70R.
Result: She had ART-associated suppression of viral replication, but subsequently her virus rebounded with the L90M and K70R mutations and M184V was newly detected.


  The glutamine side chain at position 91 on the beta5a-beta5b loop of human immunodeficiency virus type 1 reverse transcriptase is required for stabilizing the dNTP binding pocket.
 PMID: 21800837       2011       Biochemistry
Result: have reported a concomitant increase in the processivity of the mutant enzyme D76NK70RT215F, and K219Q to compensate for the increased pyrophosphorolysis, which they attribute to alterations T215F and K219Q.
Result: have reported such enhanced pyrophosphorolysis in HIV-1 RT due to mutations D76N/K70R in the high-level resistance mutants D76N, K70R,


  Prevalence and resistance mutations of non-B HIV-1 subtypes among immigrants in Southern Spain along the decade 2000-2010.
 PMID: 21871090       2011       Virology journal
Abstract: Major RT inhibitor resistance mutations K70R and A98G
Result: Patient SE37, naive for antiretroviral treatment, had A98G and K70R major mutations associated with resistance to non-nucleoside RT inhibitors (NNRTI), and nucleoside RT inhibitors (NRTI), respectively.
Table: K70R


  Drug resistance patterns and virus re-suppression among HIV-1 subtype C infected patients receiving non-nucleoside reverse transcriptase inhibitors in South Africa.
 PMID: 21927716       2011       Journal of AIDS & clinical research
Discussion: Among eight patients with TAMs, the most common pathway (seen in 6/8 patients) was TAM-2 related (D67N, K70R, K219Q/R/E); and the rest (2/8) were mixed with the TAM-1 pathway (M41L, L210W, T215Y) extending similar prior Southern African observations.


  A structural frame for understanding the role of thymidine analogue resistance mutations in resistance to zidovudine and other nucleoside analogues.
 PMID: 22024508       2011       Antiviral therapy
Abstract: These mutations, known as thymidine analogue resistance mutations (TAMs) are M41L, D67N, K70R, L210W, T215F/Y and K219E/Q.


  Resistance patterns selected by nevirapine vs. efavirenz in HIV-infected patients failing first-line antiretroviral treatment: a bayesian analysis.
 PMID: 22132100       2011       PloS one
Introduction: With regard to subtype, in subjects infected with HIV-1 subtype B, the thymidine analogue mutations pathway 1 or TAM-1 (including mutations M41L, L210W and T215Y) is probably more frequent than the TAM-2 pathway (including mutations D67N, K70R, T215F and K219E/Q), although systematic studies of these pathways have not been done.
Method: RT mutations were identified from the International AIDS Society USA Drug (IAS-USA) mutation tables, spring 2008 (http://www.iasusa.org/resistance_mutations): M41L, K65R, D67N, insertion 69,



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