HIV mutation literature information.


  SOS and IP Modifications Predominantly Affect the Yield but Not Other Properties of SOSIP.664 HIV-1 Env Glycoprotein Trimers.
 PMID: 31619555       2019       Journal of virology
Abstract: The prototypic design, designated BG505 SOSIP.664, incorporates an intersubunit disulfide bond (SOS) to covalently link the gp120 and gp41 ectodomain (gp41ECTO) subunits and a point substitution, I559P (IP), to further stabilize the gp41ECTO components.


  Associating HIV-1 envelope glycoprotein structures with states on the virus observed by smFRET.
 PMID: 30971821       2019       Nature
Figure: Env expression, processing and virus incorporation for HIV-1BG505 Q23 carrying SOS, I559P and SOS and I559P (SOS&IP) changes were tested by centrifugation of viruses from cell culture supernatants, followed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis in the presence of dithiothreitol, and western blotting using the antiserum to HIV-1
Figure: a, SOS and/or I559P (IP) changes introduced into native HIV-1BG505 Q23 Env do not influence Env processing or virus incorporation.
Figure: b, The structure-stabilizing modifications A501C and T605C (SOS) and I559P used in the design of BG505 sgp140 SOSIP.664 abort HIV-1 infectivity.


  Prime-Boost Immunizations with DNA, Modified Vaccinia Virus Ankara, and Protein-Based Vaccines Elicit Robust HIV-1 Tier 2 Neutralizing Antibodies against the CAP256 Superinfecting Virus.
 PMID: 30760570       2019       Journal of virology
Abstract: The envelope protein (Env) contained a flexible glycine linker and I559P mutation.
Method: 1A: the native leader (signal peptide [SP]) was removed and replaced with the human tissue plasminogen activator (TPA) leader sequence, the furin cleavage site was replaced with a flexible linker sequence (FL), and an I548P mutation equivalent to the I559P in the SOSIP trimers was introduced to improve the trimerization of gp41.
Figure: The native signal peptide (HIV-1 SP) was replaced with the human tissue plasminogen activator (TPA SP) sequence, the furin cleavage site (KEKR) was replaced with a flexible linker (FL) sequence, and an I559P mutation was introduced.

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