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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Show overlaps from virus related biological source
VIS [DVID: 4001918] Location [chr2: 161208307] (GRCh38)
Factor Rank on this VIS Factor Name Overlapped Records Details
1 H3K4me1 73 View
2 H3K27ac 29 View
3 H3K4me2 2 View
4 H3K36me3 2 View
5 H3K9ac 1 View


> Overlapped records detail between VIS [DVID: 4001918] and all histone modification :


GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM669891 HUES6 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM646463 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM646421 None Endothelial Cell Umbilical Vein H3K4me1 [Search on ENCODE]
GSM646374 None Epithelium Mammary Gland H3K27ac [Search on ENCODE]
GSM621418 None Adipocyte Adipose H3K4me1 [Search on ENCODE]
GSM1112825 HUES64 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1154045 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1233904 GM12878 B Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM1233936 GM12891 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1233946 GM12891 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1233967 GM12892 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234134 GM19240 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234208 GM2630 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1273658 None Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM1273660 None Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1273670 None Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1226370 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1226371 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1003453 A549 Epithelium Lung H3K4me1 [Search on ENCODE]
GSM945853 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM733660 None Epithelium Mammary Gland H3K27ac [Search on ENCODE]
GSM733705 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM733690 None Endothelial Cell Umbilical Vein H3K4me1 [Search on ENCODE]
GSM733698 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM1399017 None Multiple myeloma None H3K36me3 [Search on ENCODE]
GSM1435516 GM19239 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1435530 GM2555 Fibroblast None H3K4me1 [Search on ENCODE]
GSM1418961 IMR90 Fibroblast Lung H3K4me1 [Search on ENCODE]
GSM1418963 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1418964 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1526934 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1420887 GM19201 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550799 None Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550813 GM18855 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550816 GM19141 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1550819 GM18852 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550824 GM19206 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550834 GM18501 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550838 GM18516 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1550850 GM18517 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550885 GM19119 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550887 GM18502 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550893 GM19209 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550900 GM18916 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550901 GM18510 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550912 GM18502 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550917 GM18499 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550920 GM19114 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550929 GM18519 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550940 GM19222 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550943 GM18499 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550962 GM18909 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550964 None Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550971 GM19116 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550986 GM19223 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550997 GM18501 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1551012 GM19143 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1551013 GM19153 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1652918 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM1663107 HT1080 None Connective Tissue H3K27ac [Search on ENCODE]
GSM1670704 HuCCT1 None None H3K4me1 [Search on ENCODE]
GSM1670705 HuCCT1 None None H3K4me1 [Search on ENCODE]
GSM1918565 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM1915113 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM2037787 HCC827 Epithelium Lung H3K27ac [Search on ENCODE]
GSM2066434 NCI-H2087 None Lung H3K27ac [Search on ENCODE]
ENCSR726ZZX_1 ACC112 None None H3K4me1 [Search on ENCODE]
GSM772748 None Mesenchymal Stem Cell Adipose H3K4me1 [Search on ENCODE]
GSM1970132 MRC5 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM772800 HUES64 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM2309712 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM2309710 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM2046857 None Mesenchymal Stem Cell Umbilical Cord H3K4me1 [Search on ENCODE]
GSM1855986 MDA-MB-231 Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM1855985 MDA-MB-231 Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM2054697 K562 None human erythroleukemic cell line H3K4me1 [Search on ENCODE]
GSM1846886 None Patient derived xenograft cells None H3K4me1 [Search on ENCODE]
GSM2042910 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2187239 DU145 Epithelium Prostate H3K4me1 [Search on ENCODE]
GSM2187238 DU145 Epithelium Prostate H3K4me1 [Search on ENCODE]
GSM2175575 HCT-116 Human colorectal tumor None H3K4me1 [Search on ENCODE]
GSM2067518 MCF-7 None Breast H3K4me1 [Search on ENCODE]
GSM2265642 SF8628 None Pontine H3K4me1 [Search on ENCODE]
GSM2150373 H1299 Epithelium Lung H3K4me1 [Search on ENCODE]
GSM2667960 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2309425 MDA-MB-231 mDA None H3K4me1 [Search on ENCODE]
GSM2712766 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2712765 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2877104 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM2877103 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM2293339 A-498 None None H3K4me1 [Search on ENCODE]
GSM2550240 None Endothelial Cell None H3K27ac [Search on ENCODE]
GSM2258866 MB436 None Breast H3K27ac [Search on ENCODE]
GSM2809617 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM2723855 None Patient None H3K4me1 [Search on ENCODE]
GSM2476343 SKmel147 melanoma None H3K4me1 [Search on ENCODE]
GSM2258710 MCF-10A Epithelium Breast H3K4me1 [Search on ENCODE]
GSM2309430 MDA-MB-231 mDA None H3K4me1 [Search on ENCODE]
GSM2309431 MDA-MB-231 mDA None H3K4me1 [Search on ENCODE]
GSM2712758 HCT-116 None HCT116 H3K9ac [Search on ENCODE]
GSM2809622 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM2293321 None None Clear cell renal cell carcinoma tumor H3K4me1 [Search on ENCODE]
GSM2809621 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM2571032 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2571030 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2258873 MB436 None Breast H3K4me1 [Search on ENCODE]
GSM2293343 None Epithelium None H3K4me1 [Search on ENCODE]
Contents
Description
  • Table Description
This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.
  • Overlap
An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.