HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Show overlaps from virus related biological source
VIS [DVID: 4000194] Location [chr20: 50558734] (GRCh38)
Factor Rank on this VIS Factor Name Overlapped Records Details
1 MYC 17 View
2 JUN 13 View
3 FOS 12 View
4 TAL1 9 View
5 BRD4 7 View
6 MAX 6 View
7 EP300 6 View
8 KDM1A 6 View
9 JUND 6 View
10 ATF3 5 View
11 GATA2 4 View
12 TEAD4 4 View
13 FOSL1 4 View
14 IKZF1 4 View
15 SMARCA4 4 View
16 TRIM24 4 View
17 E2F6 3 View
18 FAIRE 3 View
19 SUMO2 3 View
20 TP63 3 View
21 BHLHE40 3 View
22 IRF1 3 View
23 HDAC2 3 View
24 JUNB 3 View
25 GRHL2 2 View
26 GATA1 2 View
27 NFE2 2 View
28 TP53 2 View
29 RBBP5 2 View
30 CEBPB 2 View
31 ATF1 2 View
32 RCOR1 2 View
33 STAT1 2 View
34 ELF1 2 View
35 FLI1 2 View
36 YAP1 2 View
37 TEAD1 2 View
38 SMC1A 2 View
39 KRAB 2 View
40 ZNF600 2 View
41 MTA2 2 View
42 PKNOX1 2 View
43 SMARCE1 2 View
44 PBX2 2 View
45 LEF1 2 View
46 C11orf30 2 View
47 ZNF318 2 View
48 HDAC1 2 View
49 L3MBTL2 2 View
50 DPF2 2 View
51 MAFG 2 View
52 MECP2 1 View
53 E2F7 1 View
54 KLF1 1 View
55 SMAD3 1 View
56 H2AZ 1 View
57 MXI1 1 View
58 TBL1XR1 1 View
59 TBP 1 View
60 ARID3A 1 View
61 ZNF384 1 View
62 MAZ 1 View
63 NFYB 1 View
64 MAFF 1 View
65 MAFK 1 View
66 UBTF 1 View
67 STAT2 1 View
68 CREB1 1 View
69 SIN3A 1 View
70 USF1 1 View
71 MEF2A 1 View
72 REST 1 View
73 CBX3 1 View
74 CEBPD 1 View
75 YY1 1 View
76 TRIM28 1 View
77 FOSL2 1 View
78 PBX3 1 View
79 GATA3 1 View
80 KDM5B 1 View
81 GATA4 1 View
82 TCF21 1 View
83 RUNX1 1 View
84 LMO2 1 View
85 SPI1 1 View
86 DAXX 1 View
87 AR 1 View
88 RAD21 1 View
89 RFX1 1 View
90 NBN 1 View
91 HES1 1 View
92 MLLT1 1 View
93 ETV1 1 View
94 GABPA 1 View
95 NKRF 1 View
96 FOXK2 1 View
97 ZBTB11 1 View
98 MYNN 1 View
99 HMBOX1 1 View
100 ZNF639 1 View
101 NCOA1 1 View
102 CBX1 1 View
103 NR2F1 1 View
104 ELF3 1 View
105 NKX2-1 1 View
106 MED1 1 View
107 E2F1 1 View
108 BPTF 1 View
109 FOXA2 1 View
110 CEBPA 1 View
111 STAT3 1 View


> Click to view overlapped records detail between VIS [DVID: 4000194] and all transcription factor binding site


Contents
Description
  • Table Description
This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.
  • Overlap
An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.