HBV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Show overlaps from virus related biological source
VIS [DVID: 1100099] Location [chr14: 94423774] (GRCh38)
Factor Rank on this VIS Factor Name Overlapped Records Details
1 CTCF 432 View
2 RAD21 51 View
3 STAG1 47 View
4 FOXA1 22 View
5 SMC3 14 View
6 SMC1A 13 View
7 H2AZ 8 View
8 MAX 6 View
9 SRF 5 View
10 CREB1 4 View
11 FOXA2 4 View
12 TRIM28 3 View
13 RELA 3 View
14 ZNF143 3 View
15 MYC 3 View
16 STAT3 2 View
17 TEAD4 2 View
18 MBD1_isoform1 2 View
19 HDAC2 2 View
20 ZNF654 2 View
21 ZNF549 2 View
22 BCL6 2 View
23 NIPBL 2 View
24 SPI1 2 View
25 STAT1 2 View
26 FAIRE 2 View
27 REST 2 View
28 KDM5B 2 View
29 BRD4 2 View
30 POLR2A 2 View
31 POLR2M 1 View
32 ELF1 1 View
33 MBD1_isoform2 1 View
34 JMJD1C 1 View
35 GATA2 1 View
36 TFAP2A 1 View
37 SNAI2 1 View
38 HIF1A 1 View
39 PROX1 1 View
40 CBX1 1 View
41 SMARCA4 1 View
42 TOP1 1 View
43 SSRP1 1 View
44 RXRA 1 View
45 TRIM22 1 View
46 ZMYM3 1 View
47 ZBTB48 1 View
48 ZNF35 1 View
49 PSIP1 1 View
50 ERG 1 View
51 ZBTB2 1 View
52 SMAD4 1 View
53 TP53 1 View
54 ZNF695 1 View
55 ZXDC 1 View
56 SMAD1 1 View
57 CEBPA 1 View
58 TFAP2C 1 View
59 HOTAIR 1 View
60 IRF4 1 View
61 MXI1 1 View
62 CTBP2 1 View
63 MECP2 1 View
64 EMX1 1 View
65 CTCFL 1 View
66 ERCC3 1 View
67 YY1 1 View
68 ICE1 1 View
69 HCFC1 1 View
70 NFE2 1 View
71 GATA1 1 View
72 KLF1 1 View
73 SUMO1 1 View
74 MYH11 1 View
75 TCF7L2 1 View
76 FOSL1 1 View
77 NR2F2 1 View
78 ZEB1 1 View
79 FOSL2 1 View
80 MYBL2 1 View
81 ATF3 1 View
82 SP1 1 View
83 EGR1 1 View
84 JUND 1 View
85 PML 1 View
86 FOXP1 1 View
87 CBX3 1 View
88 CEBPB 1 View
89 POU5F1 1 View
90 ATF2 1 View
91 GABPA 1 View
92 SP4 1 View


> Click to view overlapped records detail between VIS [DVID: 1100099] and all transcription factor binding site


Contents
Description
  • Table Description
This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.
  • Overlap
An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.