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HBV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Show overlaps from virus related biological source
VIS [DVID: 1003881] Location [chr1: 161223618] (GRCh38)
Factor Rank on this VIS Factor Name Overlapped Records Details
1 POLR2A 11 View
2 FOXA1 5 View
3 FOXA2 5 View
4 CREB1 5 View
5 GATA4 3 View
6 ATF1 3 View
7 SMAD4 3 View
8 MYC 3 View
9 REST 2 View
10 HNF1A 2 View
11 CREM 2 View
12 TGIF2 2 View
13 RAD21 2 View
14 BHLHE40 2 View
15 USF2 2 View
16 MAX 2 View
17 SREBF1 2 View
18 MNT 1 View
19 TAF1 1 View
20 TCF7 1 View
21 SOX13 1 View
22 FOXK2 1 View
23 NR2F6 1 View
24 HHEX 1 View
25 ETV4 1 View
26 CBX1 1 View
27 MED1 1 View
28 HNF4A 1 View
29 FOXO3 1 View
30 KLF10 1 View
31 L3MBTL4 1 View
32 SP1 1 View
33 CDX2 1 View
34 MAZ 1 View
35 TBP 1 View
36 RCOR1 1 View
37 EP300 1 View
38 TCF12 1 View
39 CEBPD 1 View
40 CEBPB 1 View
41 TFAP4 1 View
42 SIN3A 1 View
43 RXRA 1 View
44 FOSL2 1 View
45 USF1 1 View
46 ELF1 1 View
47 FOXH1 1 View
48 RAD51 1 View


> Click to view overlapped records detail between VIS [DVID: 1003881] and all transcription factor binding site


Contents
Description
  • Table Description
This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.
  • Overlap
An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.