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HBV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Show overlaps from virus related biological source
VIS [DVID: 1002410] Location [chr13: 110894305] (GRCh38)
Factor Rank on this VIS Factor Name Overlapped Records Details
1 FOXA1 59 View
2 AR 43 View
3 SUMO2 13 View
4 GRHL2 13 View
5 ERG 12 View
6 PR 11 View
7 HOXB13 5 View
8 POLR2A 3 View
9 BRD4 3 View
10 CEBPB 3 View
11 ARRB1 2 View
12 PKNOX1 2 View
13 ATF4 2 View
14 EP300 2 View
15 ASH2L 2 View
16 PIAS1 2 View
17 GABPA 2 View
18 XBP1 2 View
19 ESR1 2 View
20 ETV1 2 View
21 KDM5B 2 View
22 NR3C1 1 View
23 NKX3-1 1 View
24 HDAC3 1 View
25 HDAC2 1 View
26 HNF4G 1 View
27 GATA3 1 View
28 ERF 1 View
29 MYC 1 View
30 NR1H3 1 View
31 REPIN1 1 View
32 NKX2-1 1 View
33 HIF1A 1 View
34 RCOR1 1 View
35 GATA6 1 View


> Click to view overlapped records detail between VIS [DVID: 1002410] and all transcription factor binding site


Contents
Description
  • Table Description
This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.
  • Overlap
An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.