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HBV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Show overlaps from virus related biological source
VIS [DVID: 1001811] Location [chr3: 151903754] (GRCh38)
Factor Rank on this VIS Factor Name Overlapped Records Details
1 EP300 15 View
2 BRD4 8 View
3 NR3C1 6 View
4 JUN 6 View
5 RUNX1 5 View
6 RELA 5 View
7 ATF4 4 View
8 MEF2B 3 View
9 FOXA2 3 View
10 KLF15 3 View
11 FEZF1 3 View
12 YAP1 3 View
13 FOS 3 View
14 CEBPG 2 View
15 GATA2 2 View
16 CEBPA 2 View
17 H2AZ 2 View
18 MYB 2 View
19 MEF2D 2 View
20 POLR2A 2 View
21 JMJD1C 2 View
22 TAL1 2 View
23 CEBPB 2 View
24 SUMO2 1 View
25 GATA4 1 View
26 GATA6 1 View
27 CREBBP 1 View
28 CEBPD 1 View
29 MYC 1 View
30 DEK 1 View
31 TCF21 1 View
32 MED1 1 View
33 FOXO1 1 View
34 BHLHE40 1 View
35 TFAP2C 1 View
36 JUND 1 View
37 CDK8 1 View
38 TCF7L1 1 View


> Click to view overlapped records detail between VIS [DVID: 1001811] and all transcription factor binding site


Contents
Description
  • Table Description
This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.
  • Overlap
An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.