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HBV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Show overlaps from virus related biological source
VIS [DVID: 1001686] Location [chr6: 11735561] (GRCh38)
Factor Rank on this VIS Factor Name Overlapped Records Details
1 FOXA1 131 View
2 AR 97 View
3 ESR1 62 View
4 PR 18 View
5 EP300 16 View
6 GATA3 14 View
7 NR3C1 14 View
8 TFAP2C 7 View
9 PIAS1 7 View
10 POLR2A 7 View
11 HOXB13 7 View
12 RELA 6 View
13 TLE3 5 View
14 GATA2 5 View
15 SUMO2 3 View
16 HNF4G 2 View
17 CREB1 2 View
18 ARRB1 2 View
19 HIF1A 2 View
20 JUND 2 View
21 TFAP2A 2 View
22 FOXM1 2 View
23 RAD21 1 View
24 HDAC2 1 View
25 STAT3 1 View
26 BRD4 1 View
27 AHR 1 View
28 MYC 1 View
29 T 1 View
30 MEN1 1 View
31 FAIRE 1 View
32 NKX3-1 1 View
33 ESRRA 1 View
34 MED1 1 View
35 ERG 1 View
36 NCAPG 1 View
37 HOXB7 1 View
38 FOXP1 1 View
39 NR2F2 1 View
40 RARA 1 View
41 EGLN2 1 View
42 TCF12 1 View
43 KDM5B 1 View
44 SIN3A 1 View


> Click to view overlapped records detail between VIS [DVID: 1001686] and all transcription factor binding site


Contents
Description
  • Table Description
This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.
  • Overlap
An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.