HBV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Show overlaps from virus related biological source
VIS [DVID: 1001635] Location [chr6: 11735366] (GRCh38)
Factor Rank on this VIS Factor Name Overlapped Records Details
1 FOXA1 133 View
2 AR 121 View
3 ESR1 54 View
4 PR 18 View
5 NR3C1 14 View
6 HOXB13 13 View
7 EP300 13 View
8 GATA3 11 View
9 POLR2A 8 View
10 PIAS1 8 View
11 SUMO2 8 View
12 GATA2 7 View
13 RELA 6 View
14 TLE3 4 View
15 FOS 4 View
16 TFAP2C 4 View
17 MYC 3 View
18 STAT3 3 View
19 CREB1 3 View
20 ERG 2 View
21 NKX3-1 2 View
22 HNF4G 2 View
23 BRD4 2 View
24 AHR 2 View
25 TFAP2A 2 View
26 HIF1A 2 View
27 ARRB1 2 View
28 NANOG 1 View
29 SRC 1 View
30 ESRRA 1 View
31 E2F1 1 View
32 NIPBL 1 View
33 MEN1 1 View
34 FOXM1 1 View
35 MED1 1 View
36 ARNT 1 View
37 NCAPG 1 View
38 FOXP1 1 View
39 EGLN2 1 View
40 KDM5B 1 View
41 JUND 1 View
42 SIN3A 1 View
43 HDAC2 1 View
44 TCF12 1 View
45 NR2F2 1 View
46 ETV1 1 View


> Click to view overlapped records detail between VIS [DVID: 1001635] and all transcription factor binding site


Contents
Description
  • Table Description
This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.
  • Overlap
An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.