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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 161032925-161032926 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM817237 None Fibroblast Foreskin H3K27me3 [Search on ENCODE]
GSM534489 None Stromal Cell Adipose H3K27ac [Search on ENCODE]
GSM534482 None Stromal Cell Adipose H3K27ac [Search on ENCODE]
GSM1059386 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
GSM910557 None None Right Atrium H3K27ac [Search on ENCODE]
GSM1104354 HeLa-S3 Epithelium Cervix H3K4me1 [Search on ENCODE]
GSM621418 None Adipocyte Adipose H3K4me1 [Search on ENCODE]
GSM613868 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM1127173 None None Left Ventricle H3K27ac [Search on ENCODE]
GSM1164223 GM18505 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1233889 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233893 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233895 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233924 GM12890 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1233966 GM12892 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234123 GM19240 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234132 GM19240 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234148 GM2255 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234153 GM2255 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234166 GM2588 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234184 GM2610 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM798322 HeLa-S3 Epithelium Cervix H3K4me1 [Search on ENCODE]
GSM733684 HeLa-S3 Epithelium Cervix H3K27ac [Search on ENCODE]
GSM733734 HeLa-S3 Epithelium Cervix H3K4me2 [Search on ENCODE]
GSM733692 K562 Erythroblast Bone Marrow H3K4me1 [Search on ENCODE]
GSM733698 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM1333976 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1399018 None Multiple myeloma None H3K27me3 [Search on ENCODE]
GSM1402793 MCF-7 Epithelium Breast H3R26Cit [Search on ENCODE]
GSM1443807 hMADS-3 Adipocyte Adipose H3K27ac [Search on ENCODE]
GSM1420869 GM18499 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420880 GM19159 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1446921 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1550865 GM18499 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550905 GM18499 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1551012 GM19143 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1551020 GM19159 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1918446 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM1918500 K562 Erythroblast Bone Marrow H3 [Search on ENCODE]
GSM1918515 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918697 Toledo B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1645725 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1816682 None T Lymphocyte None H3K27ac [Search on ENCODE]
GSM1953837 CJM Melanoma Cell None H3K27ac [Search on ENCODE]
ENCSR094VCE_1 MM.1S B Lymphoblast Blood H3K4me1 [Search on ENCODE]
ENCSR566UMF_1 PC-3 Epithelium Prostate H3K4me1 [Search on ENCODE]
ENCSR726ZZX_1 ACC112 None None H3K4me1 [Search on ENCODE]
ENCSR769FOC_1 PC-9 Lung Cancer Cell Lung H3K27ac [Search on ENCODE]
ENCSR769FOC_2 PC-9 Lung Cancer Cell Lung H3K27ac [Search on ENCODE]
ENCSR769FOC_3 PC-9 Lung Cancer Cell Lung H3K27ac [Search on ENCODE]
ENCSR906NGD_1 None Fibroblast None H3K4me1 [Search on ENCODE]
ENCSR913MGR_1 PC-9 Lung Cancer Cell Lung H3K4me1 [Search on ENCODE]
GSM818034 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM772762 None Mesenchymal Stem Cell Adipose H3K4me1 [Search on ENCODE]
GSM2280036 None Cardiomyocyte None H3K27ac [Search on ENCODE]
GSM2280013 None Cardiomyocyte None H3K27ac [Search on ENCODE]
GSM772812 None Mesenchymal Stem Cell Adipose H3K9ac [Search on ENCODE]
GSM2435531 MO1043 None Chronic Lymphocytic Leukemia (CLL) cell line H3K27ac [Search on ENCODE]
GSM2435527 MO1043 None None H3K27ac [Search on ENCODE]
GSM2476262 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
GSM2597206 LCL Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1816681 None Treg cell None H3K18ac [Search on ENCODE]
GSM2054697 K562 None human erythroleukemic cell line H3K4me1 [Search on ENCODE]
GSM2187239 DU145 Epithelium Prostate H3K4me1 [Search on ENCODE]
GSM1970139 MRC5 Fibroblast Lung H3K27me3 [Search on ENCODE]
GSM2263007 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2262979 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2262950 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2262946 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2476258 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM2550235 None Progenitor Cells None H3 [Search on ENCODE]
GSM2258705 MCF-10A Epithelium Breast H3K27ac [Search on ENCODE]
GSM721136 HCC1954 Epithelium Mammary Gland H3K27ac [Search on ENCODE]
GSM2258909 HCC1937 None Breast H3K4me1 [Search on ENCODE]
GSM2476343 SKmel147 melanoma None H3K4me1 [Search on ENCODE]
GSM2644050 D1 ORL UVA Hepatocyte None H3K27ac [Search on ENCODE]
GSM2644051 None Hepatocyte None H3K4me1 [Search on ENCODE]
GSM2644053 None Hepatocyte None H3K27ac [Search on ENCODE]
GSM2644056 None Hepatocyte None H3K27ac [Search on ENCODE]
GSM2060768 PrEC Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2496166 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2711410 HEK293 Epithelium Embryonic Kidney H3K4me1 [Search on ENCODE]
GSM2258818 AU565 None Breast H3K4me1 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.