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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 89168999-89169260 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM986066 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM969565 LNCaP-abl Epithelium Prostate AR [Search on ENCODE]
GSM980658 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM980657 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1274871 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1274873 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM817347 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM817349 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM817350 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM817351 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM817352 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM817354 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1328950 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1328957 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1328958 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1164145 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1164146 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1164147 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1164148 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1068136 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1068137 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1071280 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1071281 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1071293 None Epithelium Prostate AR [Search on ENCODE]
GSM1410768 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1410770 VCaP Epithelium Prostate FOXP1 [Search on ENCODE]
GSM1410774 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1410789 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1354830 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1354831 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1354836 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1354837 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1354838 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1354839 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1463459 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1463460 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1463461 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1463462 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1463463 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1463464 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1555571 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1555573 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1576447 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1576449 LNCaP Epithelium Prostate VDR [Search on ENCODE]
GSM1576451 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1622629 VCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM1642762 786-O Epithelium Kidney SPI1 [Search on ENCODE]
GSM1777599 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777601 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777604 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777609 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777610 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1358396 None None Prostate AR [Search on ENCODE]
GSM1358398 None None Prostate AR [Search on ENCODE]
GSM1358400 None None Prostate AR [Search on ENCODE]
GSM1358408 None None Prostate AR [Search on ENCODE]
GSM1358411 None None Prostate AR [Search on ENCODE]
GSM1358413 None None Prostate AR [Search on ENCODE]
GSM1527024 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1527025 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1527033 CWR22Pc Epithelium Prostate AR [Search on ENCODE]
GSM1527034 CWR22Pc Epithelium Prostate AR [Search on ENCODE]
GSM1527036 CWR22Pc Epithelium Prostate AR [Search on ENCODE]
GSM1716762 None None Prostate FOXA1 [Search on ENCODE]
GSM1716765 LHSAR Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1716767 LHSAR Epithelium Prostate HOXB13 [Search on ENCODE]
GSM1716768 LHSAR Epithelium Prostate HOXB13 [Search on ENCODE]
GSM801011 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM801012 VCS2 Epithelium Prostate AR [Search on ENCODE]
GSM699634 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM699635 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
ENCSR827NWO_1 HEK293 Epithelium Embryonic Kidney FEZF1 [Search on ENCODE]
GSM1873044 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1873043 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1873040 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1873039 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1538430 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1691164 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1691142 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1586665 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1586664 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1586663 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1586661 C4-2 None Prostate AR [Search on ENCODE]
GSM1586660 C4-2 None Prostate AR [Search on ENCODE]
GSM1586658 C4-2 None Prostate AR [Search on ENCODE]
GSM2058892 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2058880 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM2058879 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1858644 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858643 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858642 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858641 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858640 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858639 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM2086297 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1863005 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2235688 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM2186466 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2186465 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2186464 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2219874 LNCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM2219871 LNCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM2219870 LNCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM2219868 LNCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM2219867 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219866 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219865 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219864 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219863 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219862 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219861 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219860 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2360997 None IN528 None POLR2A [Search on ENCODE]
GSM2543146 HeLa None None ZBTB48 [Search on ENCODE]
GSM2277160 22RV1 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2797078 None None Breast FOXA1 [Search on ENCODE]
GSM2393843 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2401446 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401466 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401467 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401468 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401469 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2716923 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2797115 None None Breast ESR1 [Search on ENCODE]
GSM2797130 None None Breast FOXA1 [Search on ENCODE]
GSM2277153 LNCaP Epithelium Prostate HNF4G [Search on ENCODE]
GSM2277150 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2122579 LNCaP-abl Epithelium Prostate AR [Search on ENCODE]
GSM2480813 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2480814 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537229 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537225 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537226 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537227 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537216 22RV1 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2393839 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2393831 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2612456 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM2350452 C4-2 None Prostate BRD4 [Search on ENCODE]
GSM717393 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM717394 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM2797083 None None Breast FOXA1 [Search on ENCODE]
GSM2797143 None None Breast PR [Search on ENCODE]
GSM2716919 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2430675 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2277161 22RV1 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2277166 22RV1 Epithelium Prostate HNF4G [Search on ENCODE]
GSM2277148 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2977503 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2977502 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2537218 LNCaP Epithelium Prostate HOXB13 [Search on ENCODE]
GSM2537213 22RV1 Epithelium Prostate AR [Search on ENCODE]
GSM2537212 22RV1 Epithelium Prostate AR [Search on ENCODE]
GSM2480802 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2480807 LNCaP Epithelium Prostate ARID1A [Search on ENCODE]
GSM2277167 22RV1 Epithelium Prostate HNF4G [Search on ENCODE]
GSM2537233 VCaP Epithelium Prostate HOXB13 [Search on ENCODE]
GSM2537230 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537234 VCaP Epithelium Prostate HOXB13 [Search on ENCODE]
GSM2480823 LNCaP Epithelium Prostate TLE3 [Search on ENCODE]
GSM2480822 LNCaP Epithelium Prostate TLE3 [Search on ENCODE]
GSM2480825 LNCaP Epithelium Prostate TLE3 [Search on ENCODE]
GSM2480824 LNCaP Epithelium Prostate TLE3 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.