Home
Virus
Gene
Disease
Dataset
Download
Help
 
HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 229046516-229046517 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM602293 H9 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM706073 iPS DF 6.9 iPSC None H3K4me1 [Search on ENCODE]
GSM608166 K562 Erythroblast Bone Marrow H3K27me3 [Search on ENCODE]
GSM468207 MR4 Promyelocytic cell Bone Marrow H3K9me3 [Search on ENCODE]
GSM468202 NB4 Promyelocytic cell Blood H3K9me3 [Search on ENCODE]
GSM468201 NB4 Promyelocytic cell Blood H3K9me3 [Search on ENCODE]
GSM575298 WIBR2 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM529415 WIBR2 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM952460 NCCIT None Embryo H3K27me3 [Search on ENCODE]
GSM817237 None Fibroblast Foreskin H3K27me3 [Search on ENCODE]
GSM817240 None Fibroblast Foreskin H3K27me3 [Search on ENCODE]
GSM958150 None Melanocyte Foreskin H3K27me3 [Search on ENCODE]
GSM969563 LNCaP-abl Epithelium Prostate H3K27me3 [Search on ENCODE]
GSM910583 None None Adrenal Gland H3K9me3 [Search on ENCODE]
GSM910572 None Epithelium Lung H3K4me1 [Search on ENCODE]
GSM910575 None None Left Ventricle H3K4me1 [Search on ENCODE]
GSM984394 C4-2B Epithelium Prostate H3ac [Search on ENCODE]
GSM1102786 None None Fetal Stomach H3K27me3 [Search on ENCODE]
GSM1102794 None None Fetal Stomach H3K4me1 [Search on ENCODE]
GSM956023 None None Sigmoid Colon H3K4me1 [Search on ENCODE]
GSM1013121 H1 Embryonic Stem Cell Embryo H3K23ac [Search on ENCODE]
GSM1013144 None None Right Atrium H3K36me3 [Search on ENCODE]
GSM1058777 None None Fetal Muscle Leg H3K4me1 [Search on ENCODE]
GSM802400 IMR90 Fibroblast Lung H3K18ac [Search on ENCODE]
GSM1160192 None None Fetal Adrenal Gland H3K27me3 [Search on ENCODE]
GSM1160197 None None Fetal Muscle Trunk H3K4me1 [Search on ENCODE]
GSM1045474 DU145 Epithelium Prostate H2A [Search on ENCODE]
GSM1045476 DU145 Epithelium Prostate H2A [Search on ENCODE]
GSM1057017 None Monocyte Blood H3K27ac [Search on ENCODE]
GSM1057018 None Monocyte Blood H3K27ac [Search on ENCODE]
GSM1057022 None Monocyte Blood H3K27ac [Search on ENCODE]
GSM1220564 None None Fetal Thymus H3K27me3 [Search on ENCODE]
GSM1273646 H7 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM1273661 None Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM1280521 None Epithelium Mammary Gland H3K27me3 [Search on ENCODE]
GSM1282364 None None Right Atrium H3K36me3 [Search on ENCODE]
GSM945320 H7 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM945160 HRE Epithelium None H3K27me3 [Search on ENCODE]
GSM788082 K562 Erythroblast Bone Marrow H3K9ac [Search on ENCODE]
GSM733753 NHDF-Ad Fibroblast Skin H3K4me2 [Search on ENCODE]
GSM1119117 None Cortex Brain H3K27ac [Search on ENCODE]
GSM1119129 None Cortex Brain H3K27ac [Search on ENCODE]
GSM1119143 None Cortex Globus Pallidus H3K27ac [Search on ENCODE]
GSM1119171 None Cortex Brain H3K27ac [Search on ENCODE]
GSM1252278 None None Stomach H3K27ac [Search on ENCODE]
GSM1252299 None None Stomach H3K27me3 [Search on ENCODE]
GSM1252300 None None Stomach H3K27me3 [Search on ENCODE]
GSM1252302 None None Stomach H3K27me3 [Search on ENCODE]
GSM1252315 None None Stomach H3K4me1 [Search on ENCODE]
GSM1294051 T47D-MTVL Epithelium Mammary Gland H3K27me3 [Search on ENCODE]
GSM1399017 None Multiple myeloma None H3K36me3 [Search on ENCODE]
GSM1399259 H1 Embryonic Stem Cell Embryo H3K9me3 [Search on ENCODE]
GSM1414734 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1358825 IMR90 Fibroblast Lung H4 [Search on ENCODE]
GSM1358827 IMR90 Fibroblast Lung H4 [Search on ENCODE]
GSM1358829 IMR90 Fibroblast Lung H4 [Search on ENCODE]
GSM1427064 None Proerythroblast Fetal Liver H3K27me3 [Search on ENCODE]
GSM1316309 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1484307 None Melanoma Cell None H3K27me3 [Search on ENCODE]
GSM1484310 None Melanoma Cell None H3K27me3 [Search on ENCODE]
GSM1484313 None Melanoma Cell None H3K27me3 [Search on ENCODE]
GSM1484314 None Melanoma Cell None H3K27me3 [Search on ENCODE]
GSM1528887 IMR90 Fibroblast Lung H3K27me3 [Search on ENCODE]
GSM790216 EWS502 Small Round Tumor Cell None H3K27me3 [Search on ENCODE]
GSM1817151 None Neural crest cell Cranial H3K27ac [Search on ENCODE]
GSM1817152 None Neural crest cell Cranial H3K27ac [Search on ENCODE]
GSM1817153 None Neural crest cell Cranial H3K27ac [Search on ENCODE]
GSM1817154 None Neural crest cell Cranial H3K27ac [Search on ENCODE]
GSM1817155 None Neural crest cell Cranial H3K27ac [Search on ENCODE]
GSM1819881 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1819883 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1819886 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1819887 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1819888 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1819889 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1819890 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1819892 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1819893 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1819894 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1612050 None Stem cell Blood H2AK119 [Search on ENCODE]
GSM1612057 None Myeloid Cell None H2AK119 [Search on ENCODE]
GSM1612059 None Myeloid Cell None H2AK119 [Search on ENCODE]
GSM1679105 LNCaP-abl Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1679106 LNCaP-abl Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1847867 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1598021 None None Fetal Brain H3K27me3 [Search on ENCODE]
GSM1598029 None None Fetal Heart H3K27me3 [Search on ENCODE]
GSM1598031 None None Fetal Heart H3K27me3 [Search on ENCODE]
GSM1598043 None None Fetal Liver H3K4me1 [Search on ENCODE]
GSM752984 iPS DF 19.11 iPSC Foreskin H3K4me3 [Search on ENCODE]
GSM752985 iPS DF 6.9 iPSC None H3K4me3 [Search on ENCODE]
ENCSR735CJR_1 None iPSC None H3K4me3 [Search on ENCODE]
GSM767344 H1 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM767345 H1 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
ENCSR927PHF_1 None iPSC None H3K4me3 [Search on ENCODE]
GSM818059 H1 Embryonic Stem Cell Embryo H4K8ac [Search on ENCODE]
GSM2421987 None None meningioma H3K27ac [Search on ENCODE]
GSM772821 None Mesenchymal Stem Cell Adipose H3K27me3 [Search on ENCODE]
GSM1890166 PC-9 Lung Cancer Cell Lung H3K27me3 [Search on ENCODE]
GSM1890165 PC-9 Lung Cancer Cell Lung H3K27me3 [Search on ENCODE]
GSM1816078 F5 Erythroid Progenitor Cell Fetal Liver H3K27me3 [Search on ENCODE]
GSM1897374 MV4-11 Leukemia Cell None H3K36me2 [Search on ENCODE]
GSM2120712 None Neuroblastoma cell None H3K4me1 [Search on ENCODE]
GSM1615883 None Fibroblast Skin H3K27me3 [Search on ENCODE]
GSM1615882 None Fibroblast Skin H3K27me3 [Search on ENCODE]
GSM2037500 None None Gastric Primary Sample H3K4me1 [Search on ENCODE]
GSM2247732 None Monocyte Blood H3K27me3 [Search on ENCODE]
GSM1541012 RWPE1 Epithelium Prostate H3K27me3 [Search on ENCODE]
GSM2140618 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM2279075 Jurkat T Lymphocyte Blood H3K27me3 [Search on ENCODE]
GSM2279073 Jurkat T Lymphocyte Blood H3K27me3 [Search on ENCODE]
GSM2279072 Jurkat T Lymphocyte Blood H3K27me3 [Search on ENCODE]
GSM2279071 Jurkat T Lymphocyte Blood H3K27me3 [Search on ENCODE]
GSM2279068 Jurkat T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM2279067 Jurkat T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM2279065 Jurkat T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM2279063 Jurkat T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM2405919 MV4;11 Acute myeloid leukemia None H3K18ac [Search on ENCODE]
GSM2152596 None None Blood H3K4me2 [Search on ENCODE]
GSM2418806 HL-60 Leukemia Cell None H3K4me1 [Search on ENCODE]
GSM2151908 None Fibroblast Skin H3K27ac [Search on ENCODE]
GSM2151907 None Fibroblast Skin H3K27ac [Search on ENCODE]
GSM2793826 None Leukemia None H3K27ac [Search on ENCODE]
GSM2793825 None Leukemia None H3K27ac [Search on ENCODE]
GSM2648927 H9 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM2366242 MLL-AF9 Blast Cells Bone Marrow H3K27ac [Search on ENCODE]
GSM2288241 PAR Astrocyte None H3K27me3 [Search on ENCODE]
GSM2288245 None Astrocyte None H3K27me3 [Search on ENCODE]
GSM2288264 None Astrocyte None H3K27me3 [Search on ENCODE]
GSM2288195 PAR Astrocyte None H3K36me3 [Search on ENCODE]
GSM2288220 None Astrocyte None H3K27me3 [Search on ENCODE]
GSM2702219 Colo-205 Colon cancer cell Colon H3K27ac [Search on ENCODE]
GSM2498492 breast triple negative tumor cell line BCSC1 None Breast H3K9me3 [Search on ENCODE]
GSM2498490 breast triple negative tumor cell line BCSC1 None Breast H3K9me3 [Search on ENCODE]
GSM874985 H1 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM874986 None Fibroblast Embryo H3K27me3 [Search on ENCODE]
GSM874987 None Fibroblast Embryo H3K27me3 [Search on ENCODE]
GSM874988 None Fibroblast Embryo H3K27me3 [Search on ENCODE]
GSM2151913 None Fibroblast Skin H3K4me3 [Search on ENCODE]
GSM2151910 None Fibroblast Skin H3K27ac [Search on ENCODE]
GSM2862459 None None Blood H3K27ac [Search on ENCODE]
GSM2288214 PAR Astrocyte None H3K27me3 [Search on ENCODE]
GSM2288219 133 Astrocyte None H3K9me3 [Search on ENCODE]
GSM2288230 None Astrocyte None H3K9me3 [Search on ENCODE]
GSM434776 H1 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.