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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 1848062-1848063 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM1102784 None Epithelium Fetal Placenta H3K27ac [Search on ENCODE]
GSM610328 CMK Megakaryocyte Blood H3K4me1 [Search on ENCODE]
GSM1233889 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233890 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233891 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233893 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233894 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233895 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233936 GM12891 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1233947 GM12891 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1233949 GM12891 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1233957 GM12892 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1233959 GM12892 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1233969 GM12892 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1233971 GM12892 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1233981 GM18486 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234064 GM19193 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234081 GM19238 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234082 GM19238 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234090 GM19238 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234101 GM19239 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234110 GM19239 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234123 GM19240 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234125 GM19240 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234135 GM19240 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234136 GM19240 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234137 GM19240 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234138 GM19240 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234147 GM2255 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234148 GM2255 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234152 GM2255 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234154 GM2255 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234166 GM2588 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234183 GM2610 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234184 GM2610 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234201 GM2630 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234223 MS1 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234224 MS1 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1254198 OCI-Ly3 B Lymphocyte Bone Marrow H3K27ac [Search on ENCODE]
GSM1003463 DND-41 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1340256 C4-2 Epithelium None H3K4me1 [Search on ENCODE]
GSM1420849 GM19093 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420880 GM19159 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM790214 EWS502 Small Round Tumor Cell None H3K4me2 [Search on ENCODE]
GSM1550792 GM19140 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550799 None Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550807 GM18859 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550809 None Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550812 GM18855 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550814 GM19127 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550830 GM18505 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1550834 GM18501 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550836 GM19225 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550849 None Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550851 GM19207 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550854 GM18853 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550857 GM18507 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1550858 GM19137 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550863 GM18501 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550865 GM18499 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550868 GM19131 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550878 GM19152 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550882 GM18912 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550886 GM18517 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550889 GM19119 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550891 GM19114 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550895 GM19209 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550896 GM19171 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550905 GM18499 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550908 GM18504 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550916 GM18507 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1550921 GM19147 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550923 GM18522 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1550925 GM18502 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550927 GM19204 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1550940 GM19222 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550945 GM19222 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550946 GM19147 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550953 GM19257 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550956 GM19204 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1550957 GM18508 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1550959 GM18909 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550965 GM19138 Lymphoblastoid None H3K4me3 [Search on ENCODE]
GSM1550969 GM19138 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550977 GM18510 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550981 GM19207 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550984 GM18916 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550990 GM18498 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550991 GM18502 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550999 GM18907 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1551000 GM19131 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1551009 GM19153 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1551012 GM19143 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1551020 GM19159 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1551021 GM19144 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1551022 GM19143 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1551023 GM19210 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1703912 None B Lymphocyte None H3K27ac [Search on ENCODE]
GSM1782704 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM1817154 None Neural crest cell Cranial H3K27ac [Search on ENCODE]
GSM1817158 None Neural crest cell Cranial H3K27ac [Search on ENCODE]
GSM1862993 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862996 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863001 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863002 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863003 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2080913 C4-2B Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1922078 None Free cell None H3K27ac [Search on ENCODE]
GSM1922075 None IN528 None H3K27ac [Search on ENCODE]
GSM1868872 C4-2B Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1868868 C4-2B Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1862986 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2279073 Jurkat T Lymphocyte Blood H3K27me3 [Search on ENCODE]
GSM2040749 GM17942 Lymphoblastoid None H3K27me3 [Search on ENCODE]
GSM2550193 None Progenitor Cells None H3 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.