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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 31921127-31921128 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM986066 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM798438 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM770759 AB32 Epithelium Mammary Gland PR [Search on ENCODE]
GSM770758 AB32 Epithelium Mammary Gland PR [Search on ENCODE]
GSM785502 None Macrophage None CEBPB [Search on ENCODE]
GSM785501 None Macrophage None SPI1 [Search on ENCODE]
GSM785495 None Monocyte None SPI1 [Search on ENCODE]
GSM983105 NCI-H3122 None Lung FOXA1 [Search on ENCODE]
GSM983104 NCI-H3122 None Lung NKX2-1 [Search on ENCODE]
GSM1010724 A549 Epithelium Lung FOXA2 [Search on ENCODE]
GSM1057011 None Monocyte Blood STAT1 [Search on ENCODE]
GSM1057013 None Monocyte Blood STAT1 [Search on ENCODE]
GSM1057025 None Monocyte Blood IRF1 [Search on ENCODE]
GSM1057026 None Monocyte Blood IRF1 [Search on ENCODE]
GSM935630 A549 Epithelium Lung CEBPB [Search on ENCODE]
GSM935553 HeLa-S3 Epithelium Cervix CEBPB [Search on ENCODE]
GSM935519 IMR90 Fibroblast Lung CEBPB [Search on ENCODE]
GSM1010826 A549 Epithelium Lung FOXA1 [Search on ENCODE]
GSM1010843 HL-60 Promyeloblast Blood SPI1 [Search on ENCODE]
GSM803409 T47D Epithelium Mammary Gland FOXA1 [Search on ENCODE]
GSM1246715 NCI-H441 Epithelium Lung TTF1 [Search on ENCODE]
GSM1246716 NCI-H441 Epithelium Lung TTF1 [Search on ENCODE]
GSM1308237 PC-3 Epithelium Prostate AR [Search on ENCODE]
GSM1421017 None Monocyte None SPI1 [Search on ENCODE]
GSM1421019 None Monocyte None SPI1 [Search on ENCODE]
GSM1427076 None Proerythroblast Fetal Liver NFE2 [Search on ENCODE]
GSM1443809 hMADS-3 Adipocyte Adipose PPARG [Search on ENCODE]
GSM1443810 hMADS-3 Adipocyte Adipose PPARG [Search on ENCODE]
GSM1537677 hMADS-3 Adipocyte Adipose MED1 [Search on ENCODE]
GSM1537678 hMADS-3 Adipocyte Adipose MED1 [Search on ENCODE]
GSM1537679 hMADS-3 Adipocyte Adipose MED1 [Search on ENCODE]
GSM1537680 hMADS-3 Adipocyte Adipose MED1 [Search on ENCODE]
GSM1480736 TSU-1621-MT None None ERG [Search on ENCODE]
GSM1557623 TSU-1621-MT None None SPI1 [Search on ENCODE]
GSM1566733 None Adipocyte None RELA [Search on ENCODE]
GSM1669026 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1669027 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1669028 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1669029 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1669030 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1669035 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669036 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669037 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669038 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669039 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669040 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1684635 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684636 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684640 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684641 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684642 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684643 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684645 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1617408 Caco-2 Epithelium Colon FOXA2 [Search on ENCODE]
GSM1703900 None B Lymphocyte None SPI1 [Search on ENCODE]
GSM1893926 MOLM-14 Myeloid Cell None CDK8 [Search on ENCODE]
GSM1893928 MOLM-14 Myeloid Cell None CDK8 [Search on ENCODE]
GSM624143 THP-1 Monocyte Blood SPI1 [Search on ENCODE]
GSM1901544 HL-60 Promyeloblast Blood JMJD1C [Search on ENCODE]
GSM1901547 NB4 Promyelocytic cell Blood JMJD1C [Search on ENCODE]
GSM1901549 THP-1 Monocyte Blood JMJD1C [Search on ENCODE]
ENCSR190VMK_2 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR299ILN_3 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR375BUB_2 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR474DCX_3 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR701TCU_2 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR752AQK_3 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR773NQB_2 A549 Epithelium Lung NR3C1 [Search on ENCODE]
ENCSR796VBR_3 A549 Epithelium Lung HES2 [Search on ENCODE]
GSM1919987 CFPAC-1 None Pancreatic ductal FOXA1 [Search on ENCODE]
GSM1919986 CFPAC-1 None Pancreatic ductal ELF3 [Search on ENCODE]
GSM1919985 CFPAC-1 None Pancreatic ductal FOXA1 [Search on ENCODE]
GSM1919984 CFPAC-1 None Pancreatic ductal KLF5 [Search on ENCODE]
GSM1574274 CFPAC-1 None Pancreatic ductal FOXA1 [Search on ENCODE]
GSM1574273 CFPAC-1 None Pancreatic ductal ELF3 [Search on ENCODE]
GSM1816090 None Hematopoietic stem and progenitor cell Bone Marrow SPI1 [Search on ENCODE]
GSM1816089 None Hematopoietic stem and progenitor cell Fetal Liver SPI1 [Search on ENCODE]
GSM1681426 None Macrophage Blood SPI1 [Search on ENCODE]
GSM1681425 None Macrophage Blood SPI1 [Search on ENCODE]
GSM1681424 None Macrophage Blood SPI1 [Search on ENCODE]
GSM1681423 None Macrophage Blood SPI1 [Search on ENCODE]
GSM1858642 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858627 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM1858625 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM1845140 MV4;11 Leukemia Cell Blood BRD4 [Search on ENCODE]
GSM2219867 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219864 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219861 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2330605 SUM229 Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2364555 None Monocyte Bone Marrow KMT2A [Search on ENCODE]
GSM2242434 T47D None Breast FOXA1 [Search on ENCODE]
GSM2242433 T47D None Breast FOXA1 [Search on ENCODE]
GSM2242428 T47D None Breast FOXA1 [Search on ENCODE]
GSM2644590 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM2644593 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM2359987 THP-1 Monocyte Blood SPI1 [Search on ENCODE]
GSM2359986 THP-1 Monocyte Blood SPI1 [Search on ENCODE]
GSM2359985 THP-1 Monocyte Blood SPI1 [Search on ENCODE]
GSM2359984 THP-1 Monocyte Blood SPI1 [Search on ENCODE]
GSM2359983 THP-1 Monocyte Blood SPI1 [Search on ENCODE]
GSM2359982 THP-1 Monocyte Blood SPI1 [Search on ENCODE]
GSM2401446 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401447 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2679938 None Monocyte Blood T [Search on ENCODE]
GSM2592808 None Macrophage Blood SPI1 [Search on ENCODE]
GSM2401465 A549 Epithelium Lung FOXA2 [Search on ENCODE]
GSM2401466 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401467 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2977504 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2592797 None Macrophage Blood CEBPB [Search on ENCODE]
GSM2537229 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM722423 U937 None Pleura CEBPA [Search on ENCODE]
GSM2537225 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537226 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537227 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM722424 U937 None Pleura CEBPA [Search on ENCODE]
GSM2695651 None Macrophage Blood SPI1 [Search on ENCODE]
GSM2695652 None Macrophage Blood SPI1 [Search on ENCODE]
GSM2592800 None Macrophage Blood CEBPB [Search on ENCODE]
GSM2592807 None Macrophage Blood SPI1 [Search on ENCODE]
GSM2359446 H3122 None Lung BRD4 [Search on ENCODE]
GSM2804467 None Monocyte Blood CEBPB [Search on ENCODE]
GSM2804466 None Monocyte Blood CEBPB [Search on ENCODE]
GSM2804465 None Monocyte Blood SPI1 [Search on ENCODE]
GSM2661793 THP-1 Monocyte Blood GLI2 [Search on ENCODE]
GSM2661795 THP-1 Monocyte Blood GLI2 [Search on ENCODE]
GSM2977503 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2977502 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2644589 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM2537230 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.