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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 31921127-31921128 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM701541 None Monocyte Blood DNase [Search on ENCODE]
GSM701503 None Monocyte Blood DNase [Search on ENCODE]
GSM665840 None Monocyte Blood DNase [Search on ENCODE]
GSM665836 None Natural Killer Cell Blood DNase [Search on ENCODE]
GSM493387 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM736513 None Monocyte Blood DNase [Search on ENCODE]
GSM1102736 None Monocyte Blood DNase [Search on ENCODE]
GSM1027326 None None Pancreas DNase [Search on ENCODE]
GSM1014527 AG10803 Fibroblast Skin DNase [Search on ENCODE]
GSM1014517 A549 Epithelium Lung DNase [Search on ENCODE]
GSM1014513 NB4 Promyelocytic cell Blood DNase [Search on ENCODE]
GSM849031 None Fibroblast Pulmonary Artery DNase [Search on ENCODE]
GSM849027 None Cortex Kidney DNase [Search on ENCODE]
GSM1338308 None Fibroblast None DNase [Search on ENCODE]
GSM736580 A549 Epithelium Lung DNase [Search on ENCODE]
GSM736626 HL-60 Promyeloblast Blood DNase [Search on ENCODE]
GSM736595 HL-60 Promyeloblast Blood DNase [Search on ENCODE]
GSM736555 None Fibroblast Pulmonary Artery DNase [Search on ENCODE]
GSM1024764 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM1024767 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM1024783 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM1024791 None Monocyte Blood DNase [Search on ENCODE]
GSM736604 NB4 Promyelocytic cell Blood DNase [Search on ENCODE]
GSM1406338 None Macrophage Blood DNase [Search on ENCODE]
GSM1406339 None Macrophage Blood DNase [Search on ENCODE]
GSM1406340 None Macrophage Blood DNase [Search on ENCODE]
GSM1406342 None Macrophage Blood DNase [Search on ENCODE]
GSM1406343 None Macrophage Blood DNase [Search on ENCODE]
GSM1406344 None Macrophage Blood DNase [Search on ENCODE]
GSM1406345 None Macrophage Blood DNase [Search on ENCODE]
GSM1406346 None Macrophage Blood DNase [Search on ENCODE]
GSM1406347 None Macrophage Blood DNase [Search on ENCODE]
GSM1406349 None Monocyte Blood DNase [Search on ENCODE]
GSM1406351 None Macrophage Blood DNase [Search on ENCODE]
GSM1406352 None Macrophage Blood DNase [Search on ENCODE]
GSM1406353 None Monocyte Blood DNase [Search on ENCODE]
GSM1406354 None Monocyte Blood DNase [Search on ENCODE]
GSM1406355 None Macrophage Blood DNase [Search on ENCODE]
GSM1406356 None Macrophage Blood DNase [Search on ENCODE]
GSM1406357 None Macrophage Blood DNase [Search on ENCODE]
GSM1443801 hMADS-3 Adipocyte Adipose DNase [Search on ENCODE]
GSM1566739 None Adipocyte None DNase [Search on ENCODE]
GSM1581821 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581822 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581823 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581825 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581826 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581831 None Myeloid Cell None DNase [Search on ENCODE]
GSM1565734 None Dendritic Cell None ATAC-seq [Search on ENCODE]
ENCSR405TXU_1 None Adipocyte None DNase [Search on ENCODE]
ENCSR426IEA_2 KBM-7 Myeloblast Blood DNase [Search on ENCODE]
ENCSR940NLN_1 PC-9 Lung Cancer Cell Lung DNase [Search on ENCODE]
ENCSR940NLN_2 PC-9 Lung Cancer Cell Lung DNase [Search on ENCODE]
ENCSR004SUL_1 None iPSC None DNase [Search on ENCODE]
ENCSR373BIX_2 None Dendritic Cell None DNase [Search on ENCODE]
ENCSR575VMI_1 None None Placenta DNase [Search on ENCODE]
ENCSR593LTJ_2 None Trophoblast cell None DNase [Search on ENCODE]
GSM2243040 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM2243039 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243038 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM2243037 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2359981 None Macrophage None ATAC-seq [Search on ENCODE]
GSM2679898 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679878 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679879 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679877 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679875 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679873 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679870 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2430669 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2679897 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679890 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679891 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679892 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679893 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679882 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679880 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679887 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679883 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679885 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679902 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679904 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2326846 SKH1 SKH-1 cells None DNase [Search on ENCODE]
GSM2679868 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2592781 None Macrophage Blood ATAC-seq [Search on ENCODE]
GSM2679894 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679895 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679896 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM722714 None Myeloblast Blood DNase [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.