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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 66351755-66351756 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM1013124 None None Right Ventricle H3K27ac [Search on ENCODE]
GSM1027297 None None Blood H3K4me1 [Search on ENCODE]
GSM916026 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM393960 None T Lymphocyte Blood H3K9ac [Search on ENCODE]
GSM1220569 None T Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM999000 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM999001 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM999004 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM999005 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM999009 None Natural Killer Cell Blood H3K27ac [Search on ENCODE]
GSM1056950 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM788080 NT2-D1 None Embryo H3K9me3 [Search on ENCODE]
GSM1252274 None None Stomach H3K27ac [Search on ENCODE]
GSM1252275 None None Stomach H3K4me1 [Search on ENCODE]
GSM1252278 None None Stomach H3K27ac [Search on ENCODE]
GSM1252279 None None Stomach H3K4me1 [Search on ENCODE]
GSM1252283 None None Stomach H3K4me1 [Search on ENCODE]
GSM1252290 None None Stomach H3K27ac [Search on ENCODE]
GSM1252291 None None Stomach H3K4me1 [Search on ENCODE]
GSM1252294 None None Stomach H3K27ac [Search on ENCODE]
GSM1252295 None None Stomach H3K4me1 [Search on ENCODE]
GSM1252314 None None Stomach H3K4me3 [Search on ENCODE]
GSM1252322 None None Stomach H3K4me3 [Search on ENCODE]
GSM1297938 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297940 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297942 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297946 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297963 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297964 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297965 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297979 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297984 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297985 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297988 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297992 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297995 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298000 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298001 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298003 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298005 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298007 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298008 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298014 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298016 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298017 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298020 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298024 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298032 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298037 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1316339 None None Pancreatic Islet H3K27ac [Search on ENCODE]
GSM1847869 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1847876 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1847878 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1847888 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1847892 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1847896 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1847897 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1847915 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1847917 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1846889 None Patient derived xenograft cells None H3K27ac [Search on ENCODE]
GSM1846897 None Patient derived xenograft cells None H3K27ac [Search on ENCODE]
GSM1846900 None Patient derived xenograft cells None H3K27ac [Search on ENCODE]
GSM1862992 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862993 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862994 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862996 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862997 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862998 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862999 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2037495 None None Gastric Primary Sample H3K27ac [Search on ENCODE]
GSM2037494 None None Gastric Primary Sample H3K27ac [Search on ENCODE]
GSM2037492 None None Gastric Primary Sample H3K27ac [Search on ENCODE]
GSM2037491 None None Gastric Primary Sample H3K27ac [Search on ENCODE]
GSM2037490 None None Gastric Primary Sample H3K27ac [Search on ENCODE]
GSM1975136 None None Gastric Primary Sample H3K27ac [Search on ENCODE]
GSM1969581 None None Gastric Primary Sample H3K27ac [Search on ENCODE]
GSM1922973 None Neurosphere None H3K27ac [Search on ENCODE]
GSM2483420 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
GSM2037512 None None Gastric Primary Sample H3K4me3 [Search on ENCODE]
GSM2037508 None None Gastric Primary Sample H3K4me1 [Search on ENCODE]
GSM2037505 None None Gastric Primary Sample H3K4me1 [Search on ENCODE]
GSM2037503 None None Gastric Primary Sample H3K4me1 [Search on ENCODE]
GSM2037501 None None Gastric Primary Sample H3K4me3 [Search on ENCODE]
GSM2040748 GM17942 Lymphoblastoid None H3K27me3 [Search on ENCODE]
GSM2040749 GM17942 Lymphoblastoid None H3K27me3 [Search on ENCODE]
GSM772880 None T Lymphocyte None H3K27ac [Search on ENCODE]
GSM772963 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM772976 None T Lymphocyte None H3K27ac [Search on ENCODE]
GSM2293442 None None Kidney H3K27ac [Search on ENCODE]
GSM2293454 None None Clear cell renal cell carcinoma tumor H3K27ac [Search on ENCODE]
GSM2040758 GM17942 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM2040757 GM17942 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM2293446 None None Clear cell renal cell carcinoma tumor H3K27ac [Search on ENCODE]
GSM2281658 None Leukemia Cell None H3K27ac [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.