HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 9556103-9556104 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM669898 HUES6 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM669892 HUES6 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM669932 HUES64 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM521890 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM706069 iPS DF 19.11 iPSC Foreskin H3K36me3 [Search on ENCODE]
GSM686938 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM686937 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM686936 LNCaP Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM686933 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM353626 LNCaP Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM686939 LNCaP Epithelium Prostate H4K5ac [Search on ENCODE]
GSM425485 MDA-MB-231 Epithelium Breast H3K36me3 [Search on ENCODE]
GSM817241 None Fibroblast Foreskin H3K36me3 [Search on ENCODE]
GSM817238 None Fibroblast Foreskin H3K36me3 [Search on ENCODE]
GSM958160 None Melanocyte Foreskin H3K36me3 [Search on ENCODE]
GSM958159 None Keratinocyte Foreskin H3K36me3 [Search on ENCODE]
GSM910576 None None Pancreas H3K4me1 [Search on ENCODE]
GSM910568 None None Stomach H3K36me3 [Search on ENCODE]
GSM910557 None None Right Atrium H3K27ac [Search on ENCODE]
GSM910571 None None Spleen H3K36me3 [Search on ENCODE]
GSM910556 None None Psoas Muscle H3K27ac [Search on ENCODE]
GSM910580 None None Left Ventricle H3K4me3 [Search on ENCODE]
GSM1125769 None Epithelium Fetal Large Intestine H3K36me3 [Search on ENCODE]
GSM621646 None None Rectal Mucosa H3K36me3 [Search on ENCODE]
GSM621461 None Adipocyte Adipose H3K36me3 [Search on ENCODE]
GSM621421 None None Duodenum Mucosa H3K36me3 [Search on ENCODE]
GSM621419 None Mesenchymal Stem Cell Bone Marrow H3K36me3 [Search on ENCODE]
GSM873694 IMR90 Fibroblast Lung H3 [Search on ENCODE]
GSM984394 C4-2B Epithelium Prostate H3ac [Search on ENCODE]
GSM984396 LNCaP Epithelium Prostate H3ac [Search on ENCODE]
GSM1102788 None Monocyte Blood H3K36me3 [Search on ENCODE]
GSM997255 None T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM997226 None T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM621425 None Adipocyte Adipose H3K4me1 [Search on ENCODE]
GSM906396 None None Left Ventricle H3K27ac [Search on ENCODE]
GSM956014 None Epithelium Lung H3K36me3 [Search on ENCODE]
GSM956012 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM1013148 None None Ovary H3K4me1 [Search on ENCODE]
GSM1013130 None None Psoas Muscle H3K27ac [Search on ENCODE]
GSM1058772 None Epithelium Fetal Small Intestine H3K36me3 [Search on ENCODE]
GSM1058773 None None Fetal Muscle Leg H3K36me3 [Search on ENCODE]
GSM908951 None None Left Ventricle H3K27ac [Search on ENCODE]
GSM765962 None Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM621685 None None Skeletal Muscle H3K4me3 [Search on ENCODE]
GSM883659 None Epithelium Colon H3K4me1 [Search on ENCODE]
GSM883687 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM883685 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM941739 None Keratinocyte Foreskin H3K36me3 [Search on ENCODE]
GSM1127070 UCSF-4* Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM1127173 None None Left Ventricle H3K27ac [Search on ENCODE]
GSM1127180 None None Stomach H3K36me3 [Search on ENCODE]
GSM621682 None None Skeletal Muscle H3K9ac [Search on ENCODE]
GSM772803 None Neuron None H3K36me3 [Search on ENCODE]
GSM1055820 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1055821 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1216737 DL23 Epithelium Colon H3K4me1 [Search on ENCODE]
GSM1220297 None None Right Ventricle H3K4me3 [Search on ENCODE]
GSM1233877 GM10847 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233901 GM12878 B Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1233921 GM12890 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233923 GM12890 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234000 GM18505 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234033 GM18951 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234051 GM19099 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234108 GM19239 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1314124 KOPT-K1 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1314131 KOPT-K1 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1314145 DND-41 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1003463 DND-41 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM945212 GM12878 B Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM945316 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM945184 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM945192 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM945211 HepG2 Epithelium Liver H3K36me3 [Search on ENCODE]
GSM945233 None Endothelial Cell Umbilical Vein H3K36me3 [Search on ENCODE]
GSM945302 K562 Erythroblast Bone Marrow H3K36me3 [Search on ENCODE]
GSM1003562 None Monocyte Blood H3K36me3 [Search on ENCODE]
GSM945226 SAEC Epithelium Lung H3K36me3 [Search on ENCODE]
GSM788076 U2OS None Bone H3K36me3B [Search on ENCODE]
GSM1383855 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM1399013 NTKO Multiple myeloma cell None H3K36me3 [Search on ENCODE]
GSM1399017 None Multiple myeloma None H3K36me3 [Search on ENCODE]
GSM1633742 None None Kidney H3K36me3 [Search on ENCODE]
GSM1633743 None None Kidney H3K36me3 [Search on ENCODE]
GSM1647623 None None Liver H3K4me3 [Search on ENCODE]
GSM1695185 None None Kidney H3K36me3 [Search on ENCODE]
GSM1922388 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1922390 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1922392 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1922394 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1645725 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1679105 LNCaP-abl Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1679106 LNCaP-abl Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1679107 LNCaP-abl Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM1606426 None None Pancreas H3K27ac [Search on ENCODE]
GSM1842713 SUM149 None None H3K27ac [Search on ENCODE]
GSM1862985 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862987 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862988 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862989 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862990 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862991 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862992 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862993 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862994 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862996 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862997 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862998 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862999 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863000 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863001 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863002 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863003 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863004 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2042878 HT29 None Colon H3K27ac [Search on ENCODE]
GSM2042890 HT29 None Colon H3K27ac [Search on ENCODE]
GSM1574235 Capan-1 None Pancreatic ductal H3K27ac [Search on ENCODE]
GSM752973 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM752974 iPS DF 19.11 iPSC Foreskin H3K36me3 [Search on ENCODE]
ENCSR566UMF_1 PC-3 Epithelium Prostate H3K4me1 [Search on ENCODE]
GSM753434 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM818034 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM772751 HUES64 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM772757 None Adipocyte Adipose H3K4me1 [Search on ENCODE]
GSM2330564 SUM159PT Mammary carcinoma cell Breast H3K27ac [Search on ENCODE]
GSM2330562 SUM159PT Mammary carcinoma cell Breast H3K27ac [Search on ENCODE]
GSM2058044 V576 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058036 V410 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058035 V389 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058046 V784 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058045 V703 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058042 V481 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058031 V1058 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM772825 None Mesenchymal Stem Cell Bone Marrow H3K36me3 [Search on ENCODE]
GSM2214093 NS134 rhabdomyosarcoma Muscle H3K27ac [Search on ENCODE]
GSM772846 None iPSC None H3K36me3 [Search on ENCODE]
GSM1574242 Capan-1 None Pancreatic ductal H3K4me1 [Search on ENCODE]
GSM1862986 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1897375 MV4-11 Leukemia Cell None H3K36me3 [Search on ENCODE]
GSM2042912 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042911 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042910 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042909 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2175575 HCT-116 Human colorectal tumor None H3K4me1 [Search on ENCODE]
GSM2175560 HCT-116 Human colorectal tumor None H3K4me1 [Search on ENCODE]
GSM2175559 HCT-116 Human colorectal tumor None H3K4me1 [Search on ENCODE]
GSM2228905 None Keratinocyte Foreskin H3K36me3 [Search on ENCODE]
GSM2228904 None Stem cell Foreskin H3K36me3 [Search on ENCODE]
GSM2279165 HEK293 Epithelium Embryonic Kidney H3K36me3 [Search on ENCODE]
GSM2279164 HEK293 Epithelium Embryonic Kidney H3K36me3 [Search on ENCODE]
GSM1948535 HEK293 Epithelium Embryonic Kidney H3K36me3 [Search on ENCODE]
GSM2280038 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2280015 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2280000 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2357615 None Ewing sacroma None H3K36me3 [Search on ENCODE]
GSM2357607 None Ewing sacroma None H3K36me3 [Search on ENCODE]
GSM2279075 Jurkat T Lymphocyte Blood H3K27me3 [Search on ENCODE]
GSM2279073 Jurkat T Lymphocyte Blood H3K27me3 [Search on ENCODE]
GSM2058081 V576 None None H3K4me1 [Search on ENCODE]
GSM2058061 None None Colon Crypt H3K4me1 [Search on ENCODE]
GSM2058059 None None Colon Crypt H3K4me1 [Search on ENCODE]
GSM2507477 None iPSC None H3K36me3 [Search on ENCODE]
GSM2316319 None None Retina H3K36me3 [Search on ENCODE]
GSM2214106 Rh4 rhabdomyosarcoma None H3K36me3 [Search on ENCODE]
GSM1915005 MG-63 Osteosarcoma cell None H3K27ac [Search on ENCODE]
GSM2258729 MCF-7 Epithelium Breast H3K4me1 [Search on ENCODE]
GSM2258727 MCF-7 Epithelium Breast H3K36me3 [Search on ENCODE]
GSM2258726 MCF-7 Epithelium Breast H3K36me3 [Search on ENCODE]
GSM2247243 JHU-06 Keratinocyte None H3K27ac [Search on ENCODE]
GSM2247245 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2711386 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM773027 None iPSC None H3K36me3 [Search on ENCODE]
GSM773038 None None Cord blood H3K4me1 [Search on ENCODE]
GSM773042 None Haematopoietic Progenitor Cell Cord blood H3K36me3 [Search on ENCODE]
GSM2640417 None Patient None H3K27ac [Search on ENCODE]
GSM2258693 76NF2V None Breast H3K4me1 [Search on ENCODE]
GSM2258907 HCC1937 None Breast H3K36me3 [Search on ENCODE]
GSM2644055 None Hepatocyte None H3K4me3 [Search on ENCODE]
GSM2258798 SKBR-3 None Breast H3K36me3 [Search on ENCODE]
GSM2258799 SKBR-3 None Breast H3K36me3 [Search on ENCODE]
GSM875813 LNCaP Epithelium Prostate H3K36me3 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.