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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 1855772-1855773 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM614637 HepG2 Epithelium Liver CTCF [Search on ENCODE]
GSM614628 HepG2 Epithelium Liver RAD21 [Search on ENCODE]
GSM614627 HepG2 Epithelium Liver STAG1 [Search on ENCODE]
GSM614626 HepG2 Epithelium Liver STAG1 [Search on ENCODE]
GSM614622 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
GSM614619 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
GSM614618 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
GSM614613 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
GSM614612 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
GSM614623 MCF-7 Epithelium Breast STAG1 [Search on ENCODE]
GSM614617 MCF-7 Epithelium Breast STAG1 [Search on ENCODE]
GSM614616 MCF-7 Epithelium Breast STAG1 [Search on ENCODE]
GSM614609 MCF-7 Epithelium Breast STAG1 [Search on ENCODE]
GSM614608 MCF-7 Epithelium Breast STAG1 [Search on ENCODE]
GSM1070125 MM1.S B Lymphocyte Blood CTCF [Search on ENCODE]
GSM646353 HepG2 Epithelium Liver CTCF [Search on ENCODE]
GSM1133651 OCI-Ly1 B cell lymphoma Bone Marrow BRD4 [Search on ENCODE]
GSM1224659 K562 Erythroblast Bone Marrow CTCF [Search on ENCODE]
GSM1233886 GM10847 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233887 GM12878 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM1233888 GM12878 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM1233911 GM12878 B Lymphocyte Blood STAG1 [Search on ENCODE]
GSM1233913 GM12878 B Lymphocyte Blood STAG1 [Search on ENCODE]
GSM1233914 GM12890 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233915 GM12890 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233916 GM12890 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233931 GM12890 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233932 GM12890 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233933 GM12891 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233934 GM12891 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233953 GM12891 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233954 GM12891 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233955 GM12892 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233956 GM12892 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233975 GM12892 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233976 GM12892 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233977 GM18486 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233979 GM18486 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233991 GM18486 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233992 GM18486 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234010 GM18526 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234026 GM18526 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234043 GM18951 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234060 GM19099 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234062 GM19193 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234077 GM19193 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234078 GM19238 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234079 GM19238 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234097 GM19238 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234098 GM19238 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234099 GM19239 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234100 GM19239 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234119 GM19239 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234120 GM19239 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234121 GM19240 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234122 GM19240 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234142 GM19240 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234143 GM19240 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234144 GM2255 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234145 GM2255 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234146 GM2255 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234160 GM2255 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234161 GM2255 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234162 GM2588 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234163 GM2588 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234164 GM2588 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234178 GM2588 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234179 GM2588 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234180 GM2610 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234181 GM2610 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234182 GM2610 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234196 GM2610 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234197 GM2610 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234198 GM2630 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234199 GM2630 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234200 GM2630 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234214 GM2630 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234215 GM2630 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234216 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234217 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234218 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234219 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234237 MS1 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234238 MS1 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1296634 OCI-Ly1 B cell lymphoma Bone Marrow BRD4 [Search on ENCODE]
GSM1296636 OCI-Ly1 B cell lymphoma Bone Marrow BRD4 [Search on ENCODE]
GSM1003582 A549 Epithelium Lung CTCF [Search on ENCODE]
GSM1003581 A549 Epithelium Lung CTCF [Search on ENCODE]
GSM1003474 None B Lymphocyte Blood CTCF [Search on ENCODE]
GSM1003464 DND-41 T Lymphocyte Blood CTCF [Search on ENCODE]
GSM733752 GM12878 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM733719 K562 Erythroblast Bone Marrow CTCF [Search on ENCODE]
GSM749748 Caco-2 Epithelium Colon CTCF [Search on ENCODE]
GSM822303 None None Brain CTCF [Search on ENCODE]
GSM749708 GM06990 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM749705 GM06990 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM1006891 GM10248 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1006870 GM10266 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1022629 GM12873 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM935332 GM12878 B Lymphocyte Blood RAD21 [Search on ENCODE]
GSM935611 GM12878 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM935376 GM12878 B Lymphocyte Blood SMC3 [Search on ENCODE]
GSM822312 GM12878 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM935379 H1 Embryonic Stem Cell Embryo RAD21 [Search on ENCODE]
GSM935571 HeLa-S3 Epithelium Cervix RAD21 [Search on ENCODE]
GSM822285 HeLa-S3 Epithelium Cervix CTCF [Search on ENCODE]
GSM822287 HepG2 Epithelium Liver CTCF [Search on ENCODE]
GSM935647 HepG2 Epithelium Liver RAD21 [Search on ENCODE]
GSM822311 K562 Erythroblast Bone Marrow CTCF [Search on ENCODE]
GSM935407 K562 Erythroblast Bone Marrow CTCF [Search on ENCODE]
GSM1006887 LNCaP Epithelium Prostate CTCF [Search on ENCODE]
GSM1006874 LNCaP Epithelium Prostate CTCF [Search on ENCODE]
GSM1022663 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM1022658 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM822308 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM822309 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM1006893 None None Brain CTCF [Search on ENCODE]
GSM1006881 None None Pancreas CTCF [Search on ENCODE]
GSM1003628 SK-N-SH_RA Neuron Brain RAD21 [Search on ENCODE]
GSM749768 WERI-Rb-1 None Eye CTCF [Search on ENCODE]
GSM803453 A549 Epithelium Lung CTCF [Search on ENCODE]
GSM1010761 A549 Epithelium Lung RAD21 [Search on ENCODE]
GSM1010801 ECC-1 Epithelium Endometrium RAD21 [Search on ENCODE]
GSM803416 GM12878 B Lymphocyte Blood RAD21 [Search on ENCODE]
GSM803466 H1 Embryonic Stem Cell Embryo RAD21 [Search on ENCODE]
GSM803502 HepG2 Epithelium Liver SRF [Search on ENCODE]
GSM803486 HepG2 Epithelium Liver CTCF [Search on ENCODE]
GSM803517 HepG2 Epithelium Liver RAD21 [Search on ENCODE]
GSM1010782 K562 Erythroblast Bone Marrow NR2F2 [Search on ENCODE]
GSM803447 K562 Erythroblast Bone Marrow RAD21 [Search on ENCODE]
GSM1010837 MCF-7 Epithelium Breast NR2F2 [Search on ENCODE]
GSM1010839 MCF-7 Epithelium Breast SRF [Search on ENCODE]
GSM1010734 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM1010791 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
GSM803497 SK-N-SH_RA Neuron Brain RAD21 [Search on ENCODE]
GSM1273199 None Erythroid Progenitor Cell Blood CTCF [Search on ENCODE]
GSM489292 GM12878 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM1267206 H1 Embryonic Stem Cell Embryo CTCF [Search on ENCODE]
GSM1267210 H1 Embryonic Stem Cell Embryo CTCF [Search on ENCODE]
GSM1689152 Jurkat T Lymphocyte Blood CTCF [Search on ENCODE]
GSM1782703 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM1817654 K562 Erythroblast Bone Marrow CTCF [Search on ENCODE]
GSM1817665 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM1817666 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM1817667 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM1861919 HepG2 Epithelium Liver RAD21 [Search on ENCODE]
GSM1861920 HepG2 Epithelium Liver RAD21 [Search on ENCODE]
GSM1861921 HepG2 Epithelium Liver RAD21 [Search on ENCODE]
GSM1861922 HepG2 Epithelium Liver RAD21 [Search on ENCODE]
GSM1861923 HepG2 Epithelium Liver RAD21 [Search on ENCODE]
GSM1861937 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
GSM1861938 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
GSM1861939 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
GSM1861940 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
GSM1861941 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
GSM1861942 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
ENCSR054FKH_1 HepG2 Epithelium Liver RAD21 [Search on ENCODE]
ENCSR054FKH_2 HepG2 Epithelium Liver RAD21 [Search on ENCODE]
ENCSR230ZWH_1 None None Liver RAD21 [Search on ENCODE]
ENCSR230ZWH_2 None None Liver RAD21 [Search on ENCODE]
ENCSR619IUE_2 None Neuron None CTCF [Search on ENCODE]
ENCSR703TNG_1 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
ENCSR703TNG_2 MCF-7 Epithelium Breast RAD21 [Search on ENCODE]
ENCSR707QWA_1 K562 Erythroblast Bone Marrow NR2F6 [Search on ENCODE]
ENCSR876GXA_1 K562 Erythroblast Bone Marrow ZBTB33 [Search on ENCODE]
ENCSR876GXA_2 K562 Erythroblast Bone Marrow ZBTB33 [Search on ENCODE]
ENCSR917QNE_1 None None Liver RAD21 [Search on ENCODE]
ENCSR970NKQ_1 K562 Erythroblast Bone Marrow NR2F1 [Search on ENCODE]
ENCSR970NKQ_2 K562 Erythroblast Bone Marrow NR2F1 [Search on ENCODE]
GSM631476 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2235693 VCaP Epithelium Prostate CTCF [Search on ENCODE]
GSM2235692 VCaP Epithelium Prostate CTCF [Search on ENCODE]
GSM2235690 VCaP Epithelium Prostate CTCF [Search on ENCODE]
GSM2040047 MCF-7 None Breast SMC1A [Search on ENCODE]
GSM2040042 MCF-7 None Breast SMC1A [Search on ENCODE]
GSM2040026 HepG2 hepatocellular carcinoma None SMC1A [Search on ENCODE]
GSM2257829 MCF-7 None Breast ESR1 [Search on ENCODE]
GSM2257828 MCF-7 None Breast ESR1 [Search on ENCODE]
GSM2364544 SEM B Lymphocyte None KMT2A [Search on ENCODE]
GSM2574750 GM12878 B Lymphocyte Blood ZBTB2 [Search on ENCODE]
GSM2467224 MCF-7 None Mammary Gland ESR1 [Search on ENCODE]
GSM2467223 MCF-7 None Mammary Gland ESR1 [Search on ENCODE]
GSM624078 HeLa Epithelium Cervix CTCF [Search on ENCODE]
GSM624080 K562 Erythroblast Bone Marrow CTCF [Search on ENCODE]
GSM748538 HepG2 Epithelium Liver CTCF [Search on ENCODE]
GSM748539 HepG2 Epithelium Liver CTCF [Search on ENCODE]
GSM2040765 GM12878 Lymphoblastoid None CTCF [Search on ENCODE]
GSM2747710 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2247248 None Keratinocyte None CTCF [Search on ENCODE]
GSM2877984 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2877982 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2877980 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2877981 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2747720 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2747723 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2747726 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2747727 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2877985 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2877105 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM2498494 breast triple negative tumor cell line BCSC1 None Breast KDM4A [Search on ENCODE]
GSM788365 K562 Erythroblast Bone Marrow CEBPA [Search on ENCODE]
GSM2443456 LCL B Lymphocyte None SMC1A [Search on ENCODE]
GSM2040770 ID00016 Lymphoblastoid None CTCF [Search on ENCODE]
GSM2877979 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2877990 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2877993 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2747715 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2747714 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2747717 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2747716 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2747713 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2747711 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2877977 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2871000 NB69 None None CTCF [Search on ENCODE]
GSM2747725 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.