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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 92973559-92973885 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM610335 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM585590 SKNO-1 Myeloblast Bone Marrow ERG [Search on ENCODE]
GSM1122317 ME-1 Leukemia Cell None EP300 [Search on ENCODE]
GSM726978 SKNO-1 Myeloblast Bone Marrow RUNX1 [Search on ENCODE]
GSM1084800 OCI-Ly7 B cell lymphoma Blood BACH2 [Search on ENCODE]
GSM1195564 None Plasma Cell None POLR2A [Search on ENCODE]
GSM1003500 None Epithelium Mammary Gland H2AZ [Search on ENCODE]
GSM935496 K562 Erythroblast Bone Marrow TAL1 [Search on ENCODE]
GSM1003608 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM935548 K562 Erythroblast Bone Marrow MYC [Search on ENCODE]
GSM935547 K562 Erythroblast Bone Marrow CCNT2 [Search on ENCODE]
GSM671400 None Lymphocyte Blood STAT5A [Search on ENCODE]
GSM935439 K562 Erythroblast Bone Marrow RCOR1 [Search on ENCODE]
GSM935504 K562 Erythroblast Bone Marrow IRF1 [Search on ENCODE]
GSM671402 None Lymphocyte Blood STAT5B [Search on ENCODE]
GSM935401 K562 Erythroblast Bone Marrow EP300 [Search on ENCODE]
GSM935505 K562 Erythroblast Bone Marrow IRF1 [Search on ENCODE]
GSM1010843 HL-60 Promyeloblast Blood SPI1 [Search on ENCODE]
GSM803443 K562 Erythroblast Bone Marrow POLR2A [Search on ENCODE]
GSM803384 K562 Erythroblast Bone Marrow SPI1 [Search on ENCODE]
GSM1010895 K562 Erythroblast Bone Marrow TEAD4 [Search on ENCODE]
GSM803540 K562 Erythroblast Bone Marrow GATA2 [Search on ENCODE]
GSM1010722 K562 Erythroblast Bone Marrow PML [Search on ENCODE]
GSM1501166 Kasumi-1 Myeloblast Blood SPI1 [Search on ENCODE]
GSM1519646 MOLT-3 T Lymphoblast Peripheral Blood TAL1 [Search on ENCODE]
GSM1446927 None Keratinocyte None TP63 [Search on ENCODE]
GSM1446928 None Keratinocyte None TP63 [Search on ENCODE]
GSM1446930 None Keratinocyte None TP63 [Search on ENCODE]
GSM1577745 None T Lymphocyte Blood STAT5B [Search on ENCODE]
GSM1577746 None T Lymphocyte Blood STAT5B [Search on ENCODE]
GSM1577747 None T Lymphocyte Blood STAT5B [Search on ENCODE]
GSM1622608 K562 Erythroblast Bone Marrow SUMO2 [Search on ENCODE]
GSM1622609 K562 Erythroblast Bone Marrow SUMO2 [Search on ENCODE]
GSM1782702 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM1782703 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM1782711 K562 Erythroblast Bone Marrow SPI1 [Search on ENCODE]
GSM1782712 K562 Erythroblast Bone Marrow SPI1 [Search on ENCODE]
GSM1645711 None Keratinocyte None BANF1 [Search on ENCODE]
GSM1645719 None Keratinocyte None EP300 [Search on ENCODE]
GSM1668938 None B Lymphocyte Tonsil BCL6 [Search on ENCODE]
GSM1888546 TF-1 Erythroblast Bone Marrow GATA2 [Search on ENCODE]
GSM1888547 TF-1 Erythroblast Bone Marrow GATA2 [Search on ENCODE]
GSM1888556 TF-1 Erythroblast Bone Marrow RAD21 [Search on ENCODE]
ENCSR004GKA_1 K562 Erythroblast Bone Marrow ZEB2 [Search on ENCODE]
ENCSR004GKA_2 K562 Erythroblast Bone Marrow ZEB2 [Search on ENCODE]
ENCSR106FRG_2 K562 Erythroblast Bone Marrow TAL1 [Search on ENCODE]
ENCSR113LAS_1 K562 Erythroblast Bone Marrow MTA2 [Search on ENCODE]
ENCSR157TCS_1 K562 Erythroblast Bone Marrow SMARCE1 [Search on ENCODE]
ENCSR322CFO_1 K562 Erythroblast Bone Marrow ZEB2 [Search on ENCODE]
ENCSR322CFO_2 K562 Erythroblast Bone Marrow ZEB2 [Search on ENCODE]
ENCSR350XWY_2 K562 Erythroblast Bone Marrow C11orf30 [Search on ENCODE]
ENCSR387UWP_1 K562 Erythroblast Bone Marrow HDAC1 [Search on ENCODE]
ENCSR587OQL_1 K562 Erythroblast Bone Marrow SMARCA4 [Search on ENCODE]
ENCSR715CCR_1 K562 Erythroblast Bone Marrow DPF2 [Search on ENCODE]
ENCSR760UVO_1 K562 Erythroblast Bone Marrow KLF16 [Search on ENCODE]
ENCSR760UVO_2 K562 Erythroblast Bone Marrow KLF16 [Search on ENCODE]
GSM1681424 None Macrophage Blood SPI1 [Search on ENCODE]
GSM1681423 None Macrophage Blood SPI1 [Search on ENCODE]
GSM1940201 K562 Leukemia Cell None SPI1 [Search on ENCODE]
GSM1940199 K562 Leukemia Cell None SPI1 [Search on ENCODE]
GSM1940198 K562 Leukemia Cell None SPI1 [Search on ENCODE]
GSM1940197 K562 Leukemia Cell None SPI1 [Search on ENCODE]
GSM1845140 MV4;11 Leukemia Cell Blood BRD4 [Search on ENCODE]
GSM1970177 None Progenitor Cells None MED12 [Search on ENCODE]
GSM2738059 None B Lymphocyte None BACH2 [Search on ENCODE]
GSM2359987 THP-1 Monocyte Blood SPI1 [Search on ENCODE]
GSM2359985 THP-1 Monocyte Blood SPI1 [Search on ENCODE]
GSM2592808 None Macrophage Blood SPI1 [Search on ENCODE]
GSM2877106 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM2877105 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM2877108 K562 Erythroblast Bone Marrow TAL1 [Search on ENCODE]
GSM722412 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM722413 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM722414 K562 Erythroblast Bone Marrow GATA2 [Search on ENCODE]
GSM722415 K562 Erythroblast Bone Marrow GATA2 [Search on ENCODE]
GSM722419 K562 Erythroblast Bone Marrow TCF7L2 [Search on ENCODE]
GSM2877121 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM2877124 K562 Erythroblast Bone Marrow TAL1 [Search on ENCODE]
GSM788364 K562 Erythroblast Bone Marrow CEBPA [Search on ENCODE]
GSM788365 K562 Erythroblast Bone Marrow CEBPA [Search on ENCODE]
GSM2050700 None Endoderm Cell Endoderm GATA6 [Search on ENCODE]
GSM831006 K562 Erythroblast Bone Marrow EP300 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.