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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 92973559-92973885 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM621433 iPS-15b iPSC None H3K27me3 [Search on ENCODE]
GSM894084 MM1.S B Lymphocyte Blood H3K4me3 [Search on ENCODE]
GSM817237 None Fibroblast Foreskin H3K27me3 [Search on ENCODE]
GSM646402 None Myoblast Skeletal Muscle H3K4me2 [Search on ENCODE]
GSM646465 NHEK Keratinocyte Skin H3K4me2 [Search on ENCODE]
GSM1102796 None None Fetal Adrenal Gland H3K4me1 [Search on ENCODE]
GSM997245 None T Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM646383 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM613885 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM1027298 None None Fetal Thymus H3K4me1 [Search on ENCODE]
GSM916064 None None Skeletal Muscle H3K27ac [Search on ENCODE]
GSM393959 None T Lymphocyte Blood H3K9ac [Search on ENCODE]
GSM1133649 OCI-Ly1 B cell lymphoma Bone Marrow H3K4me3 [Search on ENCODE]
GSM1273646 H7 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM945183 H7 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM733654 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM733768 None Myoblast Skeletal Muscle H3K4me2 [Search on ENCODE]
GSM945279 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM733686 NHEK Keratinocyte Skin H3K4me2 [Search on ENCODE]
GSM1519153 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519154 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519155 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519156 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519158 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519159 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519160 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519161 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519163 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519196 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519197 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1571914 WIS2 Embryonic Stem Cell None H3K27me3 [Search on ENCODE]
GSM1316309 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1316310 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1446920 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1446921 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1528885 H9 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM1645700 OCI-Ly1 B cell lymphoma Bone Marrow H3K4me2 [Search on ENCODE]
GSM1841291 RS4 B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1918493 K562 Erythroblast Bone Marrow H3 [Search on ENCODE]
GSM1918510 K562 Erythroblast Bone Marrow H3 [Search on ENCODE]
GSM1918513 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918515 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918519 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918521 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918526 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918527 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918528 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918529 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918531 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918535 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1645725 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1847948 None T Lymphocyte Blood H3K4me3 [Search on ENCODE]
ENCSR124MTJ_1 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR872PRJ_2 MM.1S B Lymphoblast Blood H3K9ac [Search on ENCODE]
ENCSR948YYZ_1 None None gastrocnemius medialis H3K27ac [Search on ENCODE]
GSM772750 HUES64 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM1888708 None T Lymphocyte None H3K4me2 [Search on ENCODE]
GSM1888684 None T Lymphocyte None H3K4me2 [Search on ENCODE]
GSM2370638 None resting Blood H3K4me3 [Search on ENCODE]
GSM2356643 BICR16 squamous cell carcinoma Head and neck H3K27ac [Search on ENCODE]
GSM772935 None iPSC None H3K27me3 [Search on ENCODE]
GSM2816752 None Epithelium None H3K27ac [Search on ENCODE]
GSM772971 HUES64 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM773004 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM2877104 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM2550248 None Stem cell None H3K27me3 [Search on ENCODE]
GSM2301914 IMEC Epithelium Breast H3K4me3 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.