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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 92973559-92973885 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM701526 None T Lymphocyte Cord blood DNase [Search on ENCODE]
GSM701493 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM595920 None None Fetal Brain DNase [Search on ENCODE]
GSM595913 None None Fetal Brain DNase [Search on ENCODE]
GSM530653 None None Fetal Adrenal Gland DNase [Search on ENCODE]
GSM530651 None None Fetal Brain DNase [Search on ENCODE]
GSM623517 NHEK Keratinocyte Skin DNase [Search on ENCODE]
GSM1059529 None None Cord blood DNase [Search on ENCODE]
GSM646567 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM878652 None None Fetal Brain DNase [Search on ENCODE]
GSM878658 None None Fetal Adrenal Gland DNase [Search on ENCODE]
GSM1027311 None None Fetal Adrenal Gland DNase [Search on ENCODE]
GSM1027350 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM1027328 None None Fetal Brain DNase [Search on ENCODE]
GSM817197 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM1014539 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1014523 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1014541 None Th17 None DNase [Search on ENCODE]
GSM1014522 None Th2 None DNase [Search on ENCODE]
GSM723021 None None Fetal Brain DNase [Search on ENCODE]
GSM849025 None Epithelium Lung DNase [Search on ENCODE]
GSM736566 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM736629 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM1024749 None Th1 Blood DNase [Search on ENCODE]
GSM1024744 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1251561 L1236 B Lymphocyte Blood DNase [Search on ENCODE]
GSM1581820 None Stem cell Blood DNase [Search on ENCODE]
GSM1581832 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581834 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581835 None Myeloid Cell None DNase [Search on ENCODE]
GSM1565734 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM1565735 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM1782765 K562 Erythroblast Bone Marrow ATAC-seq [Search on ENCODE]
GSM1832752 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832753 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832754 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832755 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832756 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832758 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
ENCSR148VUP_1 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR148VUP_2 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR426IEA_1 KBM-7 Myeloblast Blood DNase [Search on ENCODE]
ENCSR426IEA_2 KBM-7 Myeloblast Blood DNase [Search on ENCODE]
ENCSR564JUY_1 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR564JUY_2 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR845CFB_1 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR845CFB_2 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR167DFU_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR627GNV_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR101TGA_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR154AVE_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR154AVE_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR141VJJ_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR636VCX_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR374YBC_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR374YBC_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR622RJN_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR744QGM_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR997TXZ_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR048BUO_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR064EFK_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR087QUG_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR165BGV_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR215FCQ_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR229PFU_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR274JIR_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR373BIX_2 None Dendritic Cell None DNase [Search on ENCODE]
ENCSR423UEH_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR447ULX_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR485CIR_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR527IGO_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR560CCF_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR561XZU_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR577TXK_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR605SNG_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR632CQZ_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR643OAB_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR724SCF_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR815JAA_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR818YUC_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR826CTO_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR873PLF_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR901BRM_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR945ENZ_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR967DXR_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR982JMP_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM2243040 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM2243039 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243038 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM2243037 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243035 HL-60 Promyeloblast Blood ATAC-seq [Search on ENCODE]
GSM2243034 Gen2.2 Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243033 CAL-1 Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM816635 NHEK Keratinocyte Skin DNase [Search on ENCODE]
GSM2326845 None Plasmablast None DNase [Search on ENCODE]
GSM2326843 None AML cell None DNase [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.