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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 32949568-32949616 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM621737 None Satellite Cells Muscle H3K4me3 [Search on ENCODE]
GSM686937 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM759666 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM759665 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM686934 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM686933 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM686932 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM686931 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM503905 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM503904 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM503903 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM686939 LNCaP Epithelium Prostate H4K5ac [Search on ENCODE]
GSM915331 None None Sigmoid Colon H3K27ac [Search on ENCODE]
GSM969568 LNCaP-abl Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM910576 None None Pancreas H3K4me1 [Search on ENCODE]
GSM910559 None None Sigmoid Colon H3K27ac [Search on ENCODE]
GSM910573 None None Esophagus H3K4me1 [Search on ENCODE]
GSM910575 None None Left Ventricle H3K4me1 [Search on ENCODE]
GSM910555 None None Stomach H3K27ac [Search on ENCODE]
GSM646462 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM984394 C4-2B Epithelium Prostate H3ac [Search on ENCODE]
GSM1102783 None None Fetal Stomach H3K27ac [Search on ENCODE]
GSM670033 None None Cingulate Gyrus H3K4me1 [Search on ENCODE]
GSM621686 None None Skeletal Muscle H3K4me1 [Search on ENCODE]
GSM1013131 None Epithelium Small Intestine H3K27ac [Search on ENCODE]
GSM1013128 None None Stomach H3K27ac [Search on ENCODE]
GSM1013122 None None Stomach H3K27ac [Search on ENCODE]
GSM1112802 None None Colonic Mucosa H3K27ac [Search on ENCODE]
GSM1112796 None Smooth Muscle Cell Rectum H3K27ac [Search on ENCODE]
GSM1112801 None None Rectal Mucosa H3K27ac [Search on ENCODE]
GSM1112795 None None Rectal Mucosa H3K27ac [Search on ENCODE]
GSM621658 None None Rectal Mucosa H3K4me3 [Search on ENCODE]
GSM621432 None None Duodenum Mucosa H3K4me3 [Search on ENCODE]
GSM1038443 A549 Epithelium Lung H3K27ac [Search on ENCODE]
GSM1038459 A549 Epithelium Lung H3K9ac [Search on ENCODE]
GSM1038453 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM883683 None Epithelium Colon H3K27ac [Search on ENCODE]
GSM883687 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM883686 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM883655 None Epithelium Colon H3K4me1 [Search on ENCODE]
GSM883682 None Epithelium Colon H3K27ac [Search on ENCODE]
GSM883658 None Epithelium Colon H3K4me1 [Search on ENCODE]
GSM883685 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM883661 None Epithelium Colon H3K4me1 [Search on ENCODE]
GSM1145323 LNCaP Epithelium Prostate H3K4me1 [Search on ENCODE]
GSM1127172 None Epithelium Small Intestine H3K27ac [Search on ENCODE]
GSM1240814 GP5d None Colon H3K4me1 [Search on ENCODE]
GSM1267406 KB Cell Epithelium HeLa contaminant H3K9ac [Search on ENCODE]
GSM1267407 KB Cell Epithelium HeLa contaminant H3K9ac [Search on ENCODE]
GSM1296643 HT29 Epithelium Colon H3K27ac [Search on ENCODE]
GSM1003496 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM945320 H7 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM733698 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM1435521 GM12878 B Lymphocyte Blood H3K4me3 [Search on ENCODE]
GSM1340256 C4-2 Epithelium None H3K4me1 [Search on ENCODE]
GSM1340259 C4-2 Epithelium None H3K4me1 [Search on ENCODE]
GSM1566553 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1566554 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1566555 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1566557 KB Cell Epithelium HeLa contaminant H3K27ac [Search on ENCODE]
GSM1566559 KB Cell Epithelium HeLa contaminant H3K27ac [Search on ENCODE]
GSM1316316 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1316317 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1316324 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1316330 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1316331 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1647626 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1647627 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1653247 HEK293 Epithelium Embryonic Kidney H3K4me3 [Search on ENCODE]
GSM1670705 HuCCT1 None None H3K4me1 [Search on ENCODE]
GSM1853822 HEK293 Epithelium Embryonic Kidney H3K4me3 [Search on ENCODE]
GSM1918491 K562 Erythroblast Bone Marrow H3 [Search on ENCODE]
GSM1679101 LNCaP-abl Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1679102 LNCaP-abl Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1679105 LNCaP-abl Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1889910 caki-1 None Kidney H3K4me3 [Search on ENCODE]
GSM1862985 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862987 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862988 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862989 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862991 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862992 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862993 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862994 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862996 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862997 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862998 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862999 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863000 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863001 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863003 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863004 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1904603 None Cortex Embryonic Kidney H3K27ac [Search on ENCODE]
GSM2042874 HT29 None Colon H3K27ac [Search on ENCODE]
GSM2042876 HT29 None Colon H3K27ac [Search on ENCODE]
GSM2042878 HT29 None Colon H3K27ac [Search on ENCODE]
GSM2042882 HT29 None Colon H3K27ac [Search on ENCODE]
GSM2042888 HT29 None Colon H3K27ac [Search on ENCODE]
GSM2042892 HT29 None Colon H3K27ac [Search on ENCODE]
GSM2144749 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM2144753 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM1902615 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1970523 None Cortex Kidney H3K27ac [Search on ENCODE]
GSM2037787 HCC827 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR016PSC_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR016PSC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR016PSC_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124YCC_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124YCC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR340NAL_1 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR410BCN_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR555EAA_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR555EAA_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR596PFU_1 None None Pancreas H3K27ac [Search on ENCODE]
GSM753437 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
ENCSR692JHM_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR692JHM_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR766NHB_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR766NHB_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM767347 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
ENCSR774KCU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR834LCU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM818010 H1 Embryonic Stem Cell Embryo H2AK5ac [Search on ENCODE]
GSM818015 H1 Embryonic Stem Cell Embryo H2BK12ac [Search on ENCODE]
ENCSR905REY_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR905REY_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR905REY_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM818017 IMR90 Fibroblast Lung H2BK5ac [Search on ENCODE]
ENCSR918VQU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR918VQU_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM818058 H1 Embryonic Stem Cell Embryo H4K8ac [Search on ENCODE]
GSM1975212 None None Gastric Primary Sample H3K27ac [Search on ENCODE]
GSM1969657 None None Gastric Primary Sample H3K27ac [Search on ENCODE]
GSM2058044 V576 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058036 V410 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058035 V389 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058051 V968 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058049 V866 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058048 V855 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058046 V784 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058029 V1024 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2467316 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM2467314 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM2467313 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM2467312 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM2467310 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM2467308 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM2467307 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM1892655 None None FFPE H3K4me2 [Search on ENCODE]
GSM1892654 None None FFPE H3K4me2 [Search on ENCODE]
GSM1892634 None None Snap-frozen tissue H3K4me2 [Search on ENCODE]
GSM1892632 None None Snap-frozen tissue H3K4me2 [Search on ENCODE]
GSM1892621 None None FFPE H3K4me2 [Search on ENCODE]
GSM1666383 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM1816327 None Hematopoietic stem and progenitor cell None H3K4me1 [Search on ENCODE]
GSM1816323 None None Umbilical Cord H3K4me1 [Search on ENCODE]
GSM1862986 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2058766 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2058760 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2042898 HT29 colorectal adenocarcinoma None H3K27ac [Search on ENCODE]
GSM2175562 HCT-116 Human colorectal tumor None H3K4me2 [Search on ENCODE]
GSM1891831 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1891829 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1975188 YCC-22 None Gastric Cancer Line H3K4me3 [Search on ENCODE]
GSM1969633 YCC-22 None Gastric Cancer Line H3K4me3 [Search on ENCODE]
GSM1617371 None None Snap-frozen tissue H3K4me2 [Search on ENCODE]
GSM1617370 None None Snap-frozen tissue H3K4me2 [Search on ENCODE]
GSM1915992 YB5 colorectal adenocarcinoma Colon H3K4me2 [Search on ENCODE]
GSM2058081 V576 None None H3K4me1 [Search on ENCODE]
GSM2058073 V410 None None H3K4me1 [Search on ENCODE]
GSM2058087 VACO 868 None None H3K4me1 [Search on ENCODE]
GSM2058086 V866 None None H3K4me1 [Search on ENCODE]
GSM2058085 V855 None None H3K4me1 [Search on ENCODE]
GSM2058082 V784 None None H3K4me1 [Search on ENCODE]
GSM2058076 V432 None None H3K4me1 [Search on ENCODE]
GSM2035820 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM2360945 Huh7 None None H3K4me1 [Search on ENCODE]
GSM2640402 None Patient None H3K27ac [Search on ENCODE]
GSM2040749 GM17942 Lymphoblastoid None H3K27me3 [Search on ENCODE]
GSM2359488 A549 Epithelium Lung H3K27ac [Search on ENCODE]
GSM773043 None Haematopoietic Progenitor Cell Cord blood H3K4me1 [Search on ENCODE]
GSM2277164 22RV1 Epithelium Prostate H3K4me1 [Search on ENCODE]
GSM2359494 A549 Epithelium Lung H3K27ac [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.