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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 206675629-206675630 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM770759 AB32 Epithelium Mammary Gland PR [Search on ENCODE]
GSM999793 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1308237 PC-3 Epithelium Prostate AR [Search on ENCODE]
GSM1308240 PC-3 Epithelium Prostate AR [Search on ENCODE]
GSM1308241 PC-3 Epithelium Prostate AR [Search on ENCODE]
GSM1669014 T47D Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM1669015 T47D Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM1669016 T47D Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM1669017 T47D Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM1669018 T47D Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM1669019 T47D Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM1669026 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1669027 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1669028 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1669029 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1669030 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1669031 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1669035 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669036 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669037 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669038 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669039 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669040 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669116 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669120 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669121 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1669124 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM2644590 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM2644593 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM2125122 T47D cancer cells Breast PR [Search on ENCODE]
GSM2644589 T47D Epithelium Mammary Gland PR [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.