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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 51517475-51517476 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM621745 None Satellite Cells Muscle H3K4me3 [Search on ENCODE]
GSM521900 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM759666 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM894068 P493-6 B cell lymphoma None H3K4me3 [Search on ENCODE]
GSM894070 P493-6 B cell lymphoma None H3K4me3 [Search on ENCODE]
GSM646465 NHEK Keratinocyte Skin H3K4me2 [Search on ENCODE]
GSM868999 HepG2 Epithelium Liver H3K4me3 [Search on ENCODE]
GSM646363 HepG2 Epithelium Liver H3K4me2 [Search on ENCODE]
GSM646383 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM646362 HepG2 Epithelium Liver H3K4me2 [Search on ENCODE]
GSM950850 UKE-1 Leukemia Cell None H3K4me3 [Search on ENCODE]
GSM950844 UKE-1 Leukemia Cell None H3K4me3 [Search on ENCODE]
GSM575223 Caco-2 Epithelium Colon H3K4me2 [Search on ENCODE]
GSM575222 Caco-2 Epithelium Colon H3K4me2 [Search on ENCODE]
GSM534479 None Stromal Cell Adipose H3K4me3 [Search on ENCODE]
GSM534472 None Stromal Cell Adipose H3K4me3 [Search on ENCODE]
GSM916058 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1058765 None Epithelium Fetal Large Intestine H3K27ac [Search on ENCODE]
GSM621422 None Mesenchymal Stem Cell Bone Marrow H3K4me3 [Search on ENCODE]
GSM1164214 GM18507 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1164217 GM18522 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1164220 GM19204 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1164222 GM19239 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1233880 GM10847 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1233881 GM10847 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1233921 GM12890 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233922 GM12890 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233965 GM12892 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233984 GM18486 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233985 GM18486 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234004 GM18505 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234021 GM18526 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234038 GM18951 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234055 GM19099 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234072 GM19193 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1273653 None Endoderm Cell Embryo H3K4me2 [Search on ENCODE]
GSM1273658 None Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM1273663 None Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM1273668 None Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM1003496 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM1003561 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1003460 DND-41 T Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM945179 GM06990 B Lymphocyte Blood H3K4me3 [Search on ENCODE]
GSM945296 GM12864 B Lymphocyte Blood H3K4me3 [Search on ENCODE]
GSM733693 HepG2 Epithelium Liver H3K4me2 [Search on ENCODE]
GSM733654 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM945290 None Epithelium Mammary Gland H3K4me3 [Search on ENCODE]
GSM945292 None Fibroblast Pulmonary Artery H3K4me3 [Search on ENCODE]
GSM945284 None Fibroblast Lung H3K4me3 [Search on ENCODE]
GSM733700 None Myoblast Skeletal Muscle H3K4me2 [Search on ENCODE]
GSM945298 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM945279 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM945299 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM945297 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM945269 MCF-7 Epithelium Breast H3K4me3 [Search on ENCODE]
GSM1003533 None Astrocyte Brain H3K4me2 [Search on ENCODE]
GSM945251 NHDF-neo Fibroblast Skin H3K4me3 [Search on ENCODE]
GSM733686 NHEK Keratinocyte Skin H3K4me2 [Search on ENCODE]
GSM945262 NHLF Fibroblast Lung H3K4me3 [Search on ENCODE]
GSM733779 None Osteoblast Bone H3K4me2 [Search on ENCODE]
GSM945216 RPTEC Epithelium Kidney H3K4me3 [Search on ENCODE]
GSM1252308 None None Stomach H3K4me3 [Search on ENCODE]
GSM1252322 None None Stomach H3K4me3 [Search on ENCODE]
GSM1386345 P493-6 B cell lymphoma None H3K4me3 [Search on ENCODE]
GSM1399263 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1435523 GM12891 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1435525 GM12892 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1508945 SF7761 Neuron None H3K4me3 [Search on ENCODE]
GSM1479215 293T-Rex None None H3K4me3 [Search on ENCODE]
GSM1526934 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1526935 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1505676 HUES64 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1482878 HeLa Epithelium Cervix H3K4me3 [Search on ENCODE]
GSM1550802 GM18859 Lymphoblastoid None H3K4me3 [Search on ENCODE]
GSM1550804 GM19127 Lymphoblastoid None H3K4me3 [Search on ENCODE]
GSM1782741 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1841289 RS4 B Lymphocyte None H3K4me1 [Search on ENCODE]
GSM1841291 RS4 B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1841301 RS4 B Lymphocyte None H3K4me2 [Search on ENCODE]
GSM1841302 RS4 B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1918515 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918519 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918535 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918654 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1702524 None None Bone Marrow H3K9ac [Search on ENCODE]
GSM1889910 caki-1 None Kidney H3K4me3 [Search on ENCODE]
GSM1862998 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1574235 Capan-1 None Pancreatic ductal H3K27ac [Search on ENCODE]
GSM1574237 None None Pancreatic ductal H3K27ac [Search on ENCODE]
ENCSR016PSC_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR016PSC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR016PSC_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124YCC_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124YCC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR220XCD_2 None Hepatocyte None H3K4me2 [Search on ENCODE]
ENCSR249YGG_1 None iPSC None H3K4me1 [Search on ENCODE]
ENCSR275NCH_2 PC-3 Epithelium Prostate H3K4me3 [Search on ENCODE]
ENCSR410BCN_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR441JWF_3 PC-9 Lung Cancer Cell Lung H3K4me3 [Search on ENCODE]
ENCSR555EAA_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR555EAA_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM752978 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
ENCSR596NOF_1 None Myoblast None H3K4me3 [Search on ENCODE]
ENCSR596NOF_2 None Myoblast None H3K4me3 [Search on ENCODE]
ENCSR645BCH_2 None Neural Progenitor Cell None H3K4me2 [Search on ENCODE]
ENCSR692JHM_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR692JHM_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR766NHB_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR821IAK_2 None Neuron None H3K4me2 [Search on ENCODE]
ENCSR905REY_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM772746 None Mesenchymal Stem Cell Adipose H3K4me3 [Search on ENCODE]
GSM1922972 None Neurosphere None H3K27ac [Search on ENCODE]
GSM772817 None Mesenchymal Stem Cell Adipose H3K4me3 [Search on ENCODE]
GSM2357597 None Ewing sacroma None H3K27ac [Search on ENCODE]
GSM2507475 None iPSC None H3K27ac [Search on ENCODE]
GSM1574256 Capan-1 None Pancreatic ductal H3K4me3 [Search on ENCODE]
GSM1868869 C4-2B Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1868868 C4-2B Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1892660 MCF-7 None Snap-frozen tissue H3K4me2 [Search on ENCODE]
GSM1892655 None None FFPE H3K4me2 [Search on ENCODE]
GSM1846899 None Patient derived xenograft cells None H3K4me3 [Search on ENCODE]
GSM1606420 None endocrine Pancreas H3K4me3 [Search on ENCODE]
GSM2058766 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2058760 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2131187 T47D None Breast H3K4me3 [Search on ENCODE]
GSM2175560 HCT-116 Human colorectal tumor None H3K4me1 [Search on ENCODE]
GSM1607403 None Stem cell Foreskin H3K4me3 [Search on ENCODE]
GSM1607402 None Stem cell Foreskin H3K4me3 [Search on ENCODE]
GSM1607397 None Keratinocyte Foreskin H3K4me3 [Search on ENCODE]
GSM1607388 None Stem cell Foreskin H3K4me3 [Search on ENCODE]
GSM1976305 Raji B Lymphocyte Blood H3K4me3 [Search on ENCODE]
GSM1976295 Raji B Lymphocyte Blood H3K4me3 [Search on ENCODE]
GSM2037511 None None Gastric Primary Sample H3K4me3 [Search on ENCODE]
GSM2037501 None None Gastric Primary Sample H3K4me3 [Search on ENCODE]
GSM2309221 NCCIT Embryonal carcinoma cell None H3K4me3 [Search on ENCODE]
GSM1873571 RS4 Leukemic cells None H3K4me3 [Search on ENCODE]
GSM2280039 None Cardiomyocyte None H3K4me3 [Search on ENCODE]
GSM2280024 None Cardiomyocyte None H3K4me3 [Search on ENCODE]
GSM2280016 None Cardiomyocyte None H3K4me3 [Search on ENCODE]
GSM2279997 None Cardiomyocyte None H3K4me3 [Search on ENCODE]
GSM2279978 None Cardiomyocyte None H3K4me3 [Search on ENCODE]
GSM2279968 None Cardiomyocyte None H3K4me3 [Search on ENCODE]
GSM1915992 YB5 colorectal adenocarcinoma Colon H3K4me2 [Search on ENCODE]
GSM1922960 None Neurosphere None H3K4me3 [Search on ENCODE]
GSM1922959 None Neurosphere None H3K4me3 [Search on ENCODE]
GSM1922958 None Neurosphere None H3K4me3 [Search on ENCODE]
GSM1922956 None Neurosphere None H3K4me3 [Search on ENCODE]
GSM1922955 None Neurosphere None H3K4me3 [Search on ENCODE]
GSM1922953 None Neurosphere None H3K4me3 [Search on ENCODE]
GSM2483425 MCF-7 None Breast H3K4me3 [Search on ENCODE]
GSM2058078 V457 None None H3K4me1 [Search on ENCODE]
GSM2435529 MO1043 None None H3K4me3 [Search on ENCODE]
GSM2507479 None iPSC None H3K4me3 [Search on ENCODE]
GSM2476260 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM2476259 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM2476258 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM1422976 None Melanocytic cell None H2BK5ac [Search on ENCODE]
GSM2467209 MCF-7 None Mammary Gland H3K4me3 [Search on ENCODE]
GSM2467208 MCF-7 None Mammary Gland H3K4me3 [Search on ENCODE]
GSM2467201 MCF-7 None Mammary Gland H3K4me3 [Search on ENCODE]
GSM1907211 LNCaP Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM2293345 None Epithelium None H3K4me3 [Search on ENCODE]
GSM772978 HUES64 Embryonic Stem Cell Embryo H3K4me3 [Search on ENCODE]
GSM2712765 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2229492 MutuI B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM2258875 MB436 None Breast H3K4me3 [Search on ENCODE]
GSM2258874 MB436 None Breast H3K4me3 [Search on ENCODE]
GSM2712769 HCT-116 None HCT116 H3K4me2 [Search on ENCODE]
GSM773028 None iPSC None H3K4me1 [Search on ENCODE]
GSM2293425 None None Kidney H3K27ac [Search on ENCODE]
GSM2947304 KG1 None Bone Marrow H3K4me3 [Search on ENCODE]
GSM2711387 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2570011 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
GSM2550243 None Endothelial Cell None H3K4me3 [Search on ENCODE]
GSM822392 MCF-7 Epithelium Breast H3K4me2 [Search on ENCODE]
GSM2711385 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2258694 76NF2V None Breast H3K4me3 [Search on ENCODE]
GSM2711388 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2064461 HeLa Epithelium Cervix H3K4me3 [Search on ENCODE]
GSM2664351 SK-N-FI Neuroblastoma cell None H3K27ac [Search on ENCODE]
GSM2277164 22RV1 Epithelium Prostate H3K4me1 [Search on ENCODE]
GSM2671298 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
GSM2570001 MCF-7 Epithelium Breast H3K4me3 [Search on ENCODE]
GSM2809621 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM946853 HCT-116 None Colon H3K4me1 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.