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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 19430613-19430614 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM588568 MCF-7 Epithelium Breast H3K4me1 [Search on ENCODE]
GSM425484 MDA-MB-231 Epithelium Breast H3K4me2 [Search on ENCODE]
GSM945520 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM945521 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM646465 NHEK Keratinocyte Skin H3K4me2 [Search on ENCODE]
GSM602303 None Neuroectoderm None H3K4me1 [Search on ENCODE]
GSM868999 HepG2 Epithelium Liver H3K4me3 [Search on ENCODE]
GSM1095930 None Epithelium Cervix H3.3 [Search on ENCODE]
GSM646383 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM646362 HepG2 Epithelium Liver H3K4me2 [Search on ENCODE]
GSM950850 UKE-1 Leukemia Cell None H3K4me3 [Search on ENCODE]
GSM809015 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1009624 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1009625 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1038453 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM883687 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM883686 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM883682 None Epithelium Colon H3K27ac [Search on ENCODE]
GSM883685 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM1154045 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1154046 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1220289 None None Thymus H3K4me3 [Search on ENCODE]
GSM1267406 KB Cell Epithelium HeLa contaminant H3K9ac [Search on ENCODE]
GSM1296640 COLO-741 Epithelium Colon H3K27ac [Search on ENCODE]
GSM1214675 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1226370 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1003496 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM945853 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM733693 HepG2 Epithelium Liver H3K4me2 [Search on ENCODE]
GSM733654 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM1003533 None Astrocyte Brain H3K4me2 [Search on ENCODE]
GSM733698 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM733686 NHEK Keratinocyte Skin H3K4me2 [Search on ENCODE]
GSM945261 PANC-1 None Pancreas H3K4me3 [Search on ENCODE]
GSM1122654 MCF-7 Epithelium Breast H3K4me2 [Search on ENCODE]
GSM1122665 SUM159PT Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM1305207 None Endothelial Cell Umbilical Vein H3K4me3 [Search on ENCODE]
GSM1402462 HCC2157 Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM1566553 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1566554 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1566555 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1566556 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1415875 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM1420154 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM1420160 DKO1 Colon cancer cell Colon H3K4me1 [Search on ENCODE]
GSM1484299 None Melanoma Cell None H3K27ac [Search on ENCODE]
GSM1484301 None Melanoma Cell None H3K27ac [Search on ENCODE]
GSM1484303 None Melanoma Cell None H3K27ac [Search on ENCODE]
GSM1484304 SKMEL5 melanoma Skin H3K27ac [Search on ENCODE]
GSM1421320 None Epithelium Breast H3K27ac [Search on ENCODE]
GSM1647626 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1647627 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1701809 None Thymocyte None H3K4me3 [Search on ENCODE]
GSM1517088 HeLa Epithelium Cervix H3K4me1 [Search on ENCODE]
GSM1663108 HT1080 None Connective Tissue H3K27ac [Search on ENCODE]
GSM1670703 HuCCT1 None None H3K27ac [Search on ENCODE]
GSM1670704 HuCCT1 None None H3K4me1 [Search on ENCODE]
GSM1670705 HuCCT1 None None H3K4me1 [Search on ENCODE]
GSM1819886 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1819890 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1866128 None None Brain H3K4me1 [Search on ENCODE]
GSM1889910 caki-1 None Kidney H3K4me3 [Search on ENCODE]
GSM1598043 None None Fetal Liver H3K4me1 [Search on ENCODE]
GSM1846882 None Patient derived xenograft cells None H3K27ac [Search on ENCODE]
GSM1846885 None Patient derived xenograft cells None H3K27ac [Search on ENCODE]
GSM1866978 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM1890734 HT29 None Colon H3K27ac [Search on ENCODE]
GSM1890742 HCT-15 Epithelium Colon H3K27ac [Search on ENCODE]
GSM1890746 SW480 None Colon H3K27ac [Search on ENCODE]
GSM1890757 COLO-741 None None H3K27ac [Search on ENCODE]
GSM2029135 HeLa Epithelium Cervix H3K27ac [Search on ENCODE]
GSM2066433 NCI-H2087 None Lung H3K27ac [Search on ENCODE]
GSM2066434 NCI-H2087 None Lung H3K27ac [Search on ENCODE]
ENCSR016PSC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR016PSC_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124YCC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR555EAA_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR564IGJ_1 SK-N-SH Neuroblastoma cell Brain H3K27ac [Search on ENCODE]
ENCSR692JHM_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR692JHM_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR766NHB_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR766NHB_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR769FOC_1 PC-9 Lung Cancer Cell Lung H3K27ac [Search on ENCODE]
ENCSR769FOC_2 PC-9 Lung Cancer Cell Lung H3K27ac [Search on ENCODE]
ENCSR774KCU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR826UTD_1 PC-3 Epithelium Prostate H3K27ac [Search on ENCODE]
ENCSR826UTD_2 PC-3 Epithelium Prostate H3K27ac [Search on ENCODE]
ENCSR905REY_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR905REY_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR918VQU_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM2058036 V410 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058035 V389 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058049 V866 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058048 V855 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058041 V457 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058029 V1024 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058024 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM2058022 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM2058021 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM2265672 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM1953842 UACC-257 melanoma None H3K27ac [Search on ENCODE]
GSM1574286 CFPAC-1 None None H3K4me1 [Search on ENCODE]
GSM1574256 Capan-1 None Pancreatic ductal H3K4me3 [Search on ENCODE]
GSM1574254 PT45-P1 None Pancreatic ductal H3K4me1 [Search on ENCODE]
GSM1892634 None None Snap-frozen tissue H3K4me2 [Search on ENCODE]
GSM1892632 None None Snap-frozen tissue H3K4me2 [Search on ENCODE]
GSM1666383 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM1846902 None Patient derived xenograft cells None H3K4me3 [Search on ENCODE]
GSM1846899 None Patient derived xenograft cells None H3K4me3 [Search on ENCODE]
GSM2029590 ZR-75-30 None None H3K4me3 [Search on ENCODE]
GSM2029589 ZR-75-30 None None H3K4me2 [Search on ENCODE]
GSM2029585 ZR-75-30 None None H3K4me3 [Search on ENCODE]
GSM2029584 ZR-75-30 None None H3K4me2 [Search on ENCODE]
GSM1832645 ZR-75-30 None None H3K4me3 [Search on ENCODE]
GSM1832643 ZR-75-30 None None H3K4me2 [Search on ENCODE]
GSM2175578 HCT-116 Human colorectal tumor None H3K4me2 [Search on ENCODE]
GSM2175577 HCT-116 Human colorectal tumor None H3K4me2 [Search on ENCODE]
GSM2175562 HCT-116 Human colorectal tumor None H3K4me2 [Search on ENCODE]
GSM2175559 HCT-116 Human colorectal tumor None H3K4me1 [Search on ENCODE]
GSM1607388 None Stem cell Foreskin H3K4me3 [Search on ENCODE]
GSM1615881 None Fibroblast Skin H3K4me3 [Search on ENCODE]
GSM1615880 None Fibroblast Skin H3K4me3 [Search on ENCODE]
GSM2067530 786-O Epithelium Kidney H3K4me1 [Search on ENCODE]
GSM2067523 MCF-7 None Breast H3K27ac [Search on ENCODE]
GSM2067521 MCF-7 None Breast H3K27ac [Search on ENCODE]
GSM2067519 MCF-7 None Breast H3K4me1 [Search on ENCODE]
GSM2067518 MCF-7 None Breast H3K4me1 [Search on ENCODE]
GSM2067517 MCF-7 None Breast H3K4me1 [Search on ENCODE]
GSM2067516 MCF-7 None Breast H3K4me1 [Search on ENCODE]
GSM2442786 None Endothelial Cell Umbilical Vein H3K4me2 [Search on ENCODE]
GSM1617371 None None Snap-frozen tissue H3K4me2 [Search on ENCODE]
GSM2058076 V432 None None H3K4me1 [Search on ENCODE]
GSM2035821 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM2035820 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM2035814 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM2035813 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM2283765 None Colorectal cancer cell line None H3K4me3 [Search on ENCODE]
GSM2476260 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM2476259 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM2476258 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM1422990 None Melanocytic cell None H3K4me2 [Search on ENCODE]
GSM1422918 None Melanocytic cell None H3K4me2 [Search on ENCODE]
GSM2793826 None Leukemia None H3K27ac [Search on ENCODE]
GSM2309425 MDA-MB-231 mDA None H3K4me1 [Search on ENCODE]
GSM2648927 H9 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM2719876 TOV-21G None None H3K4me1 [Search on ENCODE]
GSM2712767 HCT-116 None HCT116 H3K4me2 [Search on ENCODE]
GSM2712764 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2712765 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2711386 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2258874 MB436 None Breast H3K4me3 [Search on ENCODE]
GSM2711391 HCT-116 None HCT116 H3K4me2 [Search on ENCODE]
GSM2712769 HCT-116 None HCT116 H3K4me2 [Search on ENCODE]
GSM1064373 None Epithelium None H3K4me1 [Search on ENCODE]
GSM2723819 786-O Epithelium Kidney H3K4me1 [Search on ENCODE]
GSM2702219 Colo-205 Colon cancer cell Colon H3K27ac [Search on ENCODE]
GSM2664034 Ishikawa Epithelium Uterus H3K27ac [Search on ENCODE]
GSM2664032 Ishikawa Epithelium Uterus H3K27ac [Search on ENCODE]
GSM2258842 HCC1954 None Breast H3K9ac [Search on ENCODE]
GSM2394410 JHU-06 Endothelial Cell None H3K4me2 [Search on ENCODE]
GSM2394411 JHU-06 Endothelial Cell None H3K4me2 [Search on ENCODE]
GSM2550240 None Endothelial Cell None H3K27ac [Search on ENCODE]
GSM2258866 MB436 None Breast H3K27ac [Search on ENCODE]
GSM2150383 H1299 Epithelium Lung H3K9ac [Search on ENCODE]
GSM2523138 HNE1 None None H3K4me1 [Search on ENCODE]
GSM2523134 HK1 None None H3K4me1 [Search on ENCODE]
GSM2809619 HCT-116 None Colon H3K4me3 [Search on ENCODE]
GSM2550201 None Endothelial Cell None H3K4me3 [Search on ENCODE]
GSM2258694 76NF2V None Breast H3K4me3 [Search on ENCODE]
GSM2258909 HCC1937 None Breast H3K4me1 [Search on ENCODE]
GSM2258902 HCC1937 None Breast H3K27ac [Search on ENCODE]
GSM2359998 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM2359999 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM2550194 None Progenitor Cells None H3K4me3 [Search on ENCODE]
GSM2550191 None Progenitor Cells None H3K27ac [Search on ENCODE]
GSM2550198 None Endothelial Cell None H3K27ac [Search on ENCODE]
GSM2258837 HCC1954 None Breast H3K4me1 [Search on ENCODE]
GSM2523128 C6661 None None H3K4me1 [Search on ENCODE]
GSM2809621 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM2571032 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2752901 AGS gastric cancer cell line None H3K4me3 [Search on ENCODE]
GSM955981 None Endothelial Cell Umbilical Vein H3K4me1 [Search on ENCODE]
GSM955982 None Endothelial Cell Umbilical Vein H3K4me1 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.