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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 151670049-151670839 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM670039 HUES48 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM669898 HUES6 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM669892 HUES6 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM759665 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM772738 None Neuron None H3K9me3 [Search on ENCODE]
GSM986083 MCF-7 Epithelium Breast H3K4me1 [Search on ENCODE]
GSM817241 None Fibroblast Foreskin H3K36me3 [Search on ENCODE]
GSM958160 None Melanocyte Foreskin H3K36me3 [Search on ENCODE]
GSM958159 None Keratinocyte Foreskin H3K36me3 [Search on ENCODE]
GSM916036 None Smooth Muscle Cell Duodenum H3K36me3 [Search on ENCODE]
GSM916067 HUES64 Embryonic Stem Cell Embryo H3K9me3 [Search on ENCODE]
GSM916054 None None Fetal Brain H3K9me3 [Search on ENCODE]
GSM1018045 A549 Epithelium Lung H3K9me3 [Search on ENCODE]
GSM772810 None Neural Progenitor Cell Brain H3K9me3 [Search on ENCODE]
GSM1177768 U2OS None Bone H3K36me3 [Search on ENCODE]
GSM1233877 GM10847 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233900 GM12878 B Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1233943 GM12891 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233965 GM12892 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234000 GM18505 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234017 GM18526 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234033 GM18951 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234051 GM19099 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234068 GM19193 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234087 GM19238 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234108 GM19239 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234131 GM19240 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234170 GM2588 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234188 GM2610 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234206 GM2630 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234228 MS1 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1249447 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1249448 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1272753 iPS C1 iPSC None H3K9me3 [Search on ENCODE]
GSM1272771 WIBR3 Embryonic Stem Cell Embryo H3K9me3 [Search on ENCODE]
GSM1314131 KOPT-K1 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1314145 DND-41 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1359507 iSLK-219 Epithelium Kidney H3K36me3 [Search on ENCODE]
GSM1003454 A549 Epithelium Lung H3K9me3 [Search on ENCODE]
GSM1003463 DND-41 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM945324 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM945192 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM788078 U2OS None Bone H3K9me3 [Search on ENCODE]
GSM1252276 None None Stomach H3K36me3 [Search on ENCODE]
GSM1252292 None None Stomach H3K36me3 [Search on ENCODE]
GSM1252296 None None Stomach H3K36me3 [Search on ENCODE]
GSM1252299 None None Stomach H3K27me3 [Search on ENCODE]
GSM1399013 NTKO Multiple myeloma cell None H3K36me3 [Search on ENCODE]
GSM1399017 None Multiple myeloma None H3K36me3 [Search on ENCODE]
GSM1399025 None Multiple myeloma None H3K36me3 [Search on ENCODE]
GSM1402801 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
GSM1289413 IMR90 Fibroblast Lung H3K9me3 [Search on ENCODE]
GSM1340256 C4-2 Epithelium None H3K4me1 [Search on ENCODE]
GSM1528890 IMR90 Fibroblast Lung H3K9me3 [Search on ENCODE]
GSM1654505 MCF-10A Epithelium Breast H3K36me3 [Search on ENCODE]
GSM1541548 HeLa Epithelium Cervix H3K9me3 [Search on ENCODE]
GSM1541549 HeLa Epithelium Cervix H3K9me3 [Search on ENCODE]
GSM1541551 HeLa Epithelium Cervix H3K9me3 [Search on ENCODE]
GSM1862993 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862997 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862998 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862999 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM753445 H1 Embryonic Stem Cell Embryo H3K9me3 [Search on ENCODE]
GSM818034 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM818055 H1 Embryonic Stem Cell Embryo H3K9me3 [Search on ENCODE]
GSM772751 HUES64 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM772759 None Mesenchymal Stem Cell Adipose H3K9me3 [Search on ENCODE]
GSM2080914 C4-2B Epithelium Prostate H3K27ac [Search on ENCODE]
GSM772775 None Mesenchymal Stem Cell Bone Marrow H3K9me3 [Search on ENCODE]
GSM772820 None Mesenchymal Stem Cell Adipose H3K36me3 [Search on ENCODE]
GSM772823 None Mesenchymal Stem Cell Adipose H3K9me3 [Search on ENCODE]
GSM772846 None iPSC None H3K36me3 [Search on ENCODE]
GSM1936775 None Mesenchymal Cell None H3K9me3 [Search on ENCODE]
GSM1624502 HEK293 Epithelium Embryonic Kidney H3K9me3 [Search on ENCODE]
GSM1709283 U2OS None Bone H3K9me3 [Search on ENCODE]
GSM1709282 U2OS None Bone H3K9me3 [Search on ENCODE]
GSM1868869 C4-2B Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2042912 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042911 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042910 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042909 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2228905 None Keratinocyte Foreskin H3K36me3 [Search on ENCODE]
GSM2228904 None Stem cell Foreskin H3K36me3 [Search on ENCODE]
GSM2308949 HeLa Epithelium Cervix H3K9me3 [Search on ENCODE]
GSM1946472 T/C28a2 Chondrocyte None H3K36me3 [Search on ENCODE]
GSM1835861 None None Kidney H3K36me3 [Search on ENCODE]
GSM1541013 RWPE1 Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM2280038 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2280023 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2280015 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2280007 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2280000 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2279976 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2279967 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2279959 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2357619 None Ewing sacroma None H3K9me3 [Search on ENCODE]
GSM2357615 None Ewing sacroma None H3K36me3 [Search on ENCODE]
GSM2483412 MCF-7 None Breast H3K36me3 [Search on ENCODE]
GSM2507477 None iPSC None H3K36me3 [Search on ENCODE]
GSM2507476 None iPSC None H3K36me3 [Search on ENCODE]
GSM2481424 None Epithelium None H3K27me3 [Search on ENCODE]
GSM2509487 K562 Leukemia None H3K9me3 [Search on ENCODE]
GSM2150376 H1299 Epithelium Lung H3K9me3 [Search on ENCODE]
GSM2359498 RT112 Epithelium Urinary Bladder H3K27ac [Search on ENCODE]
GSM2258748 ZR-75-1 None Breast H3K4me3 [Search on ENCODE]
GSM772912 HUES64 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM2258727 MCF-7 Epithelium Breast H3K36me3 [Search on ENCODE]
GSM2258726 MCF-7 Epithelium Breast H3K36me3 [Search on ENCODE]
GSM2258880 MB436 None Breast H3K9me3 [Search on ENCODE]
GSM2258780 UACC812 None Breast H3K36me3 [Search on ENCODE]
GSM773027 None iPSC None H3K36me3 [Search on ENCODE]
GSM773042 None Haematopoietic Progenitor Cell Cord blood H3K36me3 [Search on ENCODE]
GSM2537221 VCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2150380 H1299 Epithelium Lung H3K36me3 [Search on ENCODE]
GSM2514496 HeLa Epithelium Cervix H3K9me3 [Search on ENCODE]
GSM2258754 ZR-75-1 None Breast H3K9me3 [Search on ENCODE]
GSM1912807 PC-9 Lung Cancer Cell Lung H3K9me3 [Search on ENCODE]
GSM1912808 PC-9 Lung Cancer Cell Lung H3K9me3 [Search on ENCODE]
GSM2258736 MCF-7 Epithelium Breast H3K9me3 [Search on ENCODE]
GSM2258898 MB468 None Breast H3K9me3 [Search on ENCODE]
GSM2809623 HCT-116 None Colon H3K36me3 [Search on ENCODE]
GSM450268 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM2809624 HCT-116 None Colon H3K36me3 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.