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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 234887289-234887290 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM621759 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM621752 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM621741 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM534489 None Stromal Cell Adipose H3K27ac [Search on ENCODE]
GSM534468 None Stromal Cell Adipose H3K27ac [Search on ENCODE]
GSM646463 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM646403 None Myoblast Skeletal Muscle H3K4me2 [Search on ENCODE]
GSM670024 None Chondrocyte Cartilage H3K4me1 [Search on ENCODE]
GSM670000 None Chondrocyte Cartilage H3K4me1 [Search on ENCODE]
GSM669980 None Mesenchymal Stem Cell Bone Marrow H3K4me1 [Search on ENCODE]
GSM669927 None Chondrocyte Cartilage H3K4me1 [Search on ENCODE]
GSM669911 None Mesenchymal Stem Cell Bone Marrow H3K4me1 [Search on ENCODE]
GSM621425 None Adipocyte Adipose H3K4me1 [Search on ENCODE]
GSM621418 None Adipocyte Adipose H3K4me1 [Search on ENCODE]
GSM621402 None Mesenchymal Stem Cell Bone Marrow H3K4me1 [Search on ENCODE]
GSM613876 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM534473 None Stromal Cell Adipose H3K4me2 [Search on ENCODE]
GSM916064 None None Skeletal Muscle H3K27ac [Search on ENCODE]
GSM916055 None Adipocyte Adipose H3K27me3 [Search on ENCODE]
GSM621458 None Adipocyte Adipose H3K4me3 [Search on ENCODE]
GSM621691 None None Skeletal Muscle H3K9ac [Search on ENCODE]
GSM621682 None None Skeletal Muscle H3K9ac [Search on ENCODE]
GSM733705 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM733761 None Myoblast Skeletal Muscle H3K4me1 [Search on ENCODE]
GSM733700 None Myoblast Skeletal Muscle H3K4me2 [Search on ENCODE]
GSM733753 NHDF-Ad Fibroblast Skin H3K4me2 [Search on ENCODE]
GSM733698 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM733686 NHEK Keratinocyte Skin H3K4me2 [Search on ENCODE]
GSM733779 None Osteoblast Bone H3K4me2 [Search on ENCODE]
GSM733704 None Osteoblast Bone H3K4me1 [Search on ENCODE]
GSM1003506 None Osteoblast Bone H3K4me3 [Search on ENCODE]
GSM945263 WERI-Rb-1 None Eye H3K4me3 [Search on ENCODE]
GSM1435530 GM2555 Fibroblast None H3K4me1 [Search on ENCODE]
GSM1663011 EEC16 Epithelium Endometrium H3K27ac [Search on ENCODE]
GSM1576990 None Mesenchymal Stem Cell Umbilical Cord H3K27ac [Search on ENCODE]
ENCSR124MTJ_2 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR124MTJ_3 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR177QFY_1 None None Adrenal Gland H3K27ac [Search on ENCODE]
ENCSR318HUC_1 None None Aorta H3K27ac [Search on ENCODE]
ENCSR821IAK_1 None Neuron None H3K4me2 [Search on ENCODE]
ENCSR821IAK_2 None Neuron None H3K4me2 [Search on ENCODE]
ENCSR905TYC_1 None Neuron None H3K27ac [Search on ENCODE]
ENCSR905TYC_2 None Neuron None H3K27ac [Search on ENCODE]
ENCSR906NGD_3 None Fibroblast None H3K4me1 [Search on ENCODE]
ENCSR906NGD_4 None Fibroblast None H3K4me1 [Search on ENCODE]
ENCSR930HLX_1 None None Aorta H3K4me3 [Search on ENCODE]
ENCSR930HLX_2 None None Aorta H3K4me3 [Search on ENCODE]
ENCSR948YYZ_1 None None gastrocnemius medialis H3K27ac [Search on ENCODE]
ENCSR948YYZ_2 None None gastrocnemius medialis H3K27ac [Search on ENCODE]
GSM772745 None Mesenchymal Stem Cell Adipose H3K4me1 [Search on ENCODE]
GSM772761 None Mesenchymal Stem Cell Adipose H3K4me3 [Search on ENCODE]
GSM772762 None Mesenchymal Stem Cell Adipose H3K4me1 [Search on ENCODE]
GSM772816 None Mesenchymal Stem Cell Adipose H3K4me1 [Search on ENCODE]
GSM772817 None Mesenchymal Stem Cell Adipose H3K4me3 [Search on ENCODE]
GSM1888694 None T Lymphocyte None H3K4me2 [Search on ENCODE]
GSM2035813 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM1701995 None Adipocyte None H3K4me3 [Search on ENCODE]
GSM2870619 None osteosarcoma None H3K4me1 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.