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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 28029408-28029409 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM621748 None Satellite Cells Muscle H3K9ac [Search on ENCODE]
GSM621738 None Satellite Cells Muscle H3K9ac [Search on ENCODE]
GSM521870 IMR90 Fibroblast Lung H2BK120ac [Search on ENCODE]
GSM521884 IMR90 Fibroblast Lung H3K18ac [Search on ENCODE]
GSM469966 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM521900 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM521899 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM945520 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM945521 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1033758 None Plasma Cell None H3K4me3 [Search on ENCODE]
GSM646402 None Myoblast Skeletal Muscle H3K4me2 [Search on ENCODE]
GSM646427 None Endothelial Cell Umbilical Vein H3K9ac [Search on ENCODE]
GSM646423 None Endothelial Cell Umbilical Vein H3K4me2 [Search on ENCODE]
GSM646415 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM646424 None Endothelial Cell Umbilical Vein H3K4me3 [Search on ENCODE]
GSM646422 None Endothelial Cell Umbilical Vein H3K4me2 [Search on ENCODE]
GSM621679 None None Skeletal Muscle H3K4me1 [Search on ENCODE]
GSM809015 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1058772 None Epithelium Fetal Small Intestine H3K36me3 [Search on ENCODE]
GSM1112787 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112797 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112792 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112798 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM621422 None Mesenchymal Stem Cell Bone Marrow H3K4me3 [Search on ENCODE]
GSM1154045 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1154046 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1154047 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1233889 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233890 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233891 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233894 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1233906 GM12878 B Lymphocyte Blood H3K4me3 [Search on ENCODE]
GSM1233925 GM12890 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1233936 GM12891 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1233937 GM12891 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1233949 GM12891 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1233957 GM12892 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1233958 GM12892 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1233959 GM12892 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1233969 GM12892 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1233971 GM12892 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1233981 GM18486 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234123 GM19240 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234124 GM19240 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234125 GM19240 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234137 GM19240 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234138 GM19240 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234147 GM2255 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234148 GM2255 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234165 GM2588 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234166 GM2588 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234184 GM2610 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234201 GM2630 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234202 GM2630 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234210 GM2630 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234222 MS1 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234223 MS1 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234224 MS1 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234232 MS1 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1226370 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1226371 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM945187 AG04449 Fibroblast Skin H3K4me3 [Search on ENCODE]
GSM733768 None Myoblast Skeletal Muscle H3K4me2 [Search on ENCODE]
GSM733691 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM733683 None Endothelial Cell Umbilical Vein H3K4me2 [Search on ENCODE]
GSM733735 None Endothelial Cell Umbilical Vein H3K9ac [Search on ENCODE]
GSM733673 None Endothelial Cell Umbilical Vein H3K4me3 [Search on ENCODE]
GSM733710 None Astrocyte Brain H3K4me1 [Search on ENCODE]
GSM1003533 None Astrocyte Brain H3K4me2 [Search on ENCODE]
GSM733781 NHLF Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM733779 None Osteoblast Bone H3K4me2 [Search on ENCODE]
GSM733704 None Osteoblast Bone H3K4me1 [Search on ENCODE]
GSM1003506 None Osteoblast Bone H3K4me3 [Search on ENCODE]
GSM1305207 None Endothelial Cell Umbilical Vein H3K4me3 [Search on ENCODE]
GSM1305208 None Endothelial Cell Umbilical Vein H3K4me3 [Search on ENCODE]
GSM1517556 SK-N-MC None Brain H3K27ac [Search on ENCODE]
GSM1418963 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1418964 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1526934 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1526935 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1420851 None Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420854 GM19209 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420855 GM19116 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420870 GM18519 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420874 None Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420877 GM18855 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420878 GM18912 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420887 GM19201 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1663011 EEC16 Epithelium Endometrium H3K27ac [Search on ENCODE]
GSM1663018 FT246 Epithelium Fallopian tube secretory H3K27ac [Search on ENCODE]
GSM1663027 FT33 Epithelium Fallopian tube secretory H3K27ac [Search on ENCODE]
GSM1663035 IOE11 Epithelium Ovary H3K27ac [Search on ENCODE]
GSM1663036 IOE11 Epithelium Ovary H3K27ac [Search on ENCODE]
GSM1663045 IOE4 Epithelium Ovary H3K27ac [Search on ENCODE]
GSM1515744 SF268 None None H3K27ac [Search on ENCODE]
GSM1515745 SF268 None None H3K27ac [Search on ENCODE]
GSM1550792 GM19140 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550809 None Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550812 GM18855 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550821 GM19141 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1550833 GM18519 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550849 None Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550882 GM18912 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550885 GM19119 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550889 GM19119 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550891 GM19114 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550897 GM18861 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550913 GM18861 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550920 GM19114 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550923 GM18522 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1550925 GM18502 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550931 GM18519 Lymphoblastoid None H3K4me3 [Search on ENCODE]
GSM1550945 GM19222 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550969 GM19138 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550974 GM19152 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550977 GM18510 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550984 GM18916 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550991 GM18502 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550992 GM19093 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1551001 GM18858 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1551004 GM19223 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1551006 GM19201 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1551007 GM19201 Lymphoblastoid None H3K4me3 [Search on ENCODE]
GSM1551020 GM19159 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1576985 None Mesenchymal Stem Cell Umbilical Cord H3K27ac [Search on ENCODE]
GSM1576986 None Mesenchymal Stem Cell Umbilical Cord H3K27ac [Search on ENCODE]
GSM1576988 None Mesenchymal Stem Cell Umbilical Cord H3K27ac [Search on ENCODE]
GSM1576989 None Mesenchymal Stem Cell Umbilical Cord H3K27ac [Search on ENCODE]
GSM2046840 None Mesenchymal Stem Cell Umbilical Cord H3K27ac [Search on ENCODE]
ENCSR007YOT_1 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR007YOT_2 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR007YOT_3 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR007YOT_4 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR082NQB_2 H929 B Lymphocyte Bone Marrow H3K4me3 [Search on ENCODE]
ENCSR082NQB_3 H929 B Lymphocyte Bone Marrow H3K4me3 [Search on ENCODE]
ENCSR124MTJ_1 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR124MTJ_2 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR124MTJ_3 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR564IGJ_1 SK-N-SH Neuroblastoma cell Brain H3K27ac [Search on ENCODE]
ENCSR564IGJ_2 SK-N-SH Neuroblastoma cell Brain H3K27ac [Search on ENCODE]
GSM767341 H1 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM767342 H1 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
ENCSR975GZA_2 SK-N-SH Neuroblastoma cell Brain H3K4me3 [Search on ENCODE]
GSM832838 IMR90 Fibroblast Lung H2BK5ac [Search on ENCODE]
GSM2188470 None Osteoblast None H3K27ac [Search on ENCODE]
GSM2188467 None Osteoblast None H3K27ac [Search on ENCODE]
GSM772793 HUES48 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM2435531 MO1043 None Chronic Lymphocytic Leukemia (CLL) cell line H3K27ac [Search on ENCODE]
GSM2308934 None hTERT immortalized endometriosis cells None H3K27ac [Search on ENCODE]
GSM1574254 PT45-P1 None Pancreatic ductal H3K4me1 [Search on ENCODE]
GSM1663092 None Hematopoietic Stem Cell Liver H3K4me3 [Search on ENCODE]
GSM1876037 None Smooth Muscle Cell Coronary artery smooth muscle H3K27ac [Search on ENCODE]
GSM1876036 None Smooth Muscle Cell Coronary artery smooth muscle H3K27ac [Search on ENCODE]
GSM2442786 None Endothelial Cell Umbilical Vein H3K4me2 [Search on ENCODE]
GSM1831035 None Endothelial Cell Umbilical Vein H3K9ac [Search on ENCODE]
GSM1831033 None Endothelial Cell Umbilical Vein H3K9ac [Search on ENCODE]
GSM1831032 None Endothelial Cell Umbilical Vein H3K9ac [Search on ENCODE]
GSM1831031 None Endothelial Cell Umbilical Vein H3K9ac [Search on ENCODE]
GSM1831027 None Endothelial Cell Umbilical Vein H3K9ac [Search on ENCODE]
GSM1422990 None Melanocytic cell None H3K4me2 [Search on ENCODE]
GSM2550212 None Fibroblast None H3K27ac [Search on ENCODE]
GSM2550233 None Progenitor Cells None H3K27ac [Search on ENCODE]
GSM2550236 None Progenitor Cells None H3K4me3 [Search on ENCODE]
GSM2664365 None neural crest line None H3K27ac [Search on ENCODE]
GSM2394411 JHU-06 Endothelial Cell None H3K4me2 [Search on ENCODE]
GSM2550240 None Endothelial Cell None H3K27ac [Search on ENCODE]
GSM2550243 None Endothelial Cell None H3K4me3 [Search on ENCODE]
GSM2258866 MB436 None Breast H3K27ac [Search on ENCODE]
GSM2870619 None osteosarcoma None H3K4me1 [Search on ENCODE]
GSM2550194 None Progenitor Cells None H3K4me3 [Search on ENCODE]
GSM2550191 None Progenitor Cells None H3K27ac [Search on ENCODE]
GSM2550193 None Progenitor Cells None H3 [Search on ENCODE]
GSM2550198 None Endothelial Cell None H3K27ac [Search on ENCODE]
GSM2550257 None Fibroblast None H3K4me3 [Search on ENCODE]
GSM2550254 None Fibroblast None H3K27ac [Search on ENCODE]
GSM2787356 HS-ES-2M Embryonic Stem Cell None H3K4me3 [Search on ENCODE]
GSM2258873 MB436 None Breast H3K4me1 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.