Home
Virus
Gene
Disease
Dataset
Download
Help
 
HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 205611308-205611309 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM614610 MCF-7 Epithelium Breast ESR1 [Search on ENCODE]
GSM720423 MCF-7 Epithelium Breast GATA3 [Search on ENCODE]
GSM720422 MCF-7 Epithelium Breast GATA3 [Search on ENCODE]
GSM925736 MCF7-LTED Epithelium Mammary Gland FAIRE [Search on ENCODE]
GSM986063 MCF-7 Epithelium Breast ESR1 [Search on ENCODE]
GSM986067 MCF-7 Epithelium Breast GATA3 [Search on ENCODE]
GSM1198712 MCF-7 Epithelium Breast ESR1 [Search on ENCODE]
GSM798426 None Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM798427 None Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM798402 None Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM798434 MCF-7 Epithelium Breast ESR1 [Search on ENCODE]
GSM798425 MCF-7 Epithelium Breast ESR1 [Search on ENCODE]
GSM970258 None Proerythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM1125983 None Epithelium Bronchia GRHL2 [Search on ENCODE]
GSM999793 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1003714 None Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM1278240 None Proerythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM1241752 MCF-7 Epithelium Breast GATA3 [Search on ENCODE]
GSM1241754 T47D Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1241756 MCF-7 Epithelium Breast GATA3 [Search on ENCODE]
GSM1241758 T47D Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1366686 None Keratinocyte Foreskin TP63 [Search on ENCODE]
GSM1010803 H1 Embryonic Stem Cell Embryo POLR2A [Search on ENCODE]
GSM1010837 MCF-7 Epithelium Breast NR2F2 [Search on ENCODE]
GSM1010783 MCF-7 Epithelium Breast GATA3 [Search on ENCODE]
GSM1010889 MCF-7 Epithelium Breast CEBPB [Search on ENCODE]
GSM1010862 MCF-7 Epithelium Breast SIN3A [Search on ENCODE]
GSM1010887 SK-N-SH Neuroblastoma cell Brain PBX3 [Search on ENCODE]
GSM1010738 SK-N-SH Neuroblastoma cell Brain GATA3 [Search on ENCODE]
GSM1010900 SK-N-SH Neuroblastoma cell Brain TCF12 [Search on ENCODE]
GSM803409 T47D Epithelium Mammary Gland FOXA1 [Search on ENCODE]
GSM803514 T47D Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM803539 T47D Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM439777 None Keratinocyte Skin TP63 [Search on ENCODE]
GSM1333964 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM1068136 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1068137 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1071280 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1410770 VCaP Epithelium Prostate FOXP1 [Search on ENCODE]
GSM1410789 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM538930 None Keratinocyte Skin TP63 [Search on ENCODE]
GSM1446927 None Keratinocyte None TP63 [Search on ENCODE]
GSM1446928 None Keratinocyte None TP63 [Search on ENCODE]
GSM1446929 None Keratinocyte None TP63 [Search on ENCODE]
GSM1446930 None Keratinocyte None TP63 [Search on ENCODE]
GSM838400 C4-2B Epithelium Prostate RUNX2 [Search on ENCODE]
GSM1669039 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1358400 None None Prostate AR [Search on ENCODE]
GSM1358411 None None Prostate AR [Search on ENCODE]
GSM1716762 None None Prostate FOXA1 [Search on ENCODE]
ENCSR338DGO_1 HEK293 Epithelium Embryonic Kidney SCRT2 [Search on ENCODE]
ENCSR423RTK_1 MCF-7 Epithelium Breast GATA3 [Search on ENCODE]
ENCSR423RTK_2 MCF-7 Epithelium Breast GATA3 [Search on ENCODE]
GSM501687 Saos-2 Osteosarcoma cell Bone TP73 [Search on ENCODE]
GSM631471 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM631473 T47D Epithelium Mammary Gland FOXA1 [Search on ENCODE]
GSM1855965 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1855964 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1856030 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1856029 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1856013 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1856012 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1855971 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1855970 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1855969 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1855968 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1919987 CFPAC-1 None Pancreatic ductal FOXA1 [Search on ENCODE]
GSM1919986 CFPAC-1 None Pancreatic ductal ELF3 [Search on ENCODE]
GSM1919985 CFPAC-1 None Pancreatic ductal FOXA1 [Search on ENCODE]
GSM1919984 CFPAC-1 None Pancreatic ductal KLF5 [Search on ENCODE]
GSM1574276 CFPAC-1 None Pancreatic ductal IRF1 [Search on ENCODE]
GSM1574274 CFPAC-1 None Pancreatic ductal FOXA1 [Search on ENCODE]
GSM1574273 CFPAC-1 None Pancreatic ductal ELF3 [Search on ENCODE]
GSM1586663 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2058892 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1858659 T47D Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858657 T47D Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858656 T47D Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858655 T47D Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858654 T47D Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858653 T47D Embryonic Stem Cell Breast ESR1 [Search on ENCODE]
GSM1858652 T47D Embryonic Stem Cell Breast ESR1 [Search on ENCODE]
GSM1858644 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858643 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858642 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858641 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858640 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858639 ZR-75-1 Embryonic Stem Cell Breast FOXA1 [Search on ENCODE]
GSM1858638 ZR-75-1 Embryonic Stem Cell Breast ESR1 [Search on ENCODE]
GSM1858637 ZR-75-1 Embryonic Stem Cell Breast ESR1 [Search on ENCODE]
GSM1858635 ZR-75-1 Embryonic Stem Cell Breast ESR1 [Search on ENCODE]
GSM1858633 ZR-75-1 Embryonic Stem Cell Breast NR3C1 [Search on ENCODE]
GSM1858629 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM1858628 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM1858627 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM1858626 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM1858623 MCF-7 Epithelium Breast ESR1 [Search on ENCODE]
GSM1858622 MCF-7 Epithelium Breast ESR1 [Search on ENCODE]
GSM1858619 MCF-7 Epithelium Breast NR3C1 [Search on ENCODE]
GSM1858618 MCF-7 Epithelium Breast NR3C1 [Search on ENCODE]
GSM1863005 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2042852 HT29 colorectal adenocarcinoma None NR1H3 [Search on ENCODE]
GSM2042846 HT29 colorectal adenocarcinoma None NR1H3 [Search on ENCODE]
GSM2071225 MCF-7 None None ESR1 [Search on ENCODE]
GSM2040048 MCF-7 None Breast ESR1 [Search on ENCODE]
GSM2040043 MCF-7 None Breast ESR1 [Search on ENCODE]
GSM2171836 MCF-7 asynchonous cells Breast GRHL2 [Search on ENCODE]
GSM2242433 T47D None Breast FOXA1 [Search on ENCODE]
GSM2242428 T47D None Breast FOXA1 [Search on ENCODE]
GSM2467225 MCF-7 None Mammary Gland ESR1 [Search on ENCODE]
GSM2467224 MCF-7 None Mammary Gland ESR1 [Search on ENCODE]
GSM2467223 MCF-7 None Mammary Gland ESR1 [Search on ENCODE]
GSM2467222 MCF-7 None Mammary Gland ESR1 [Search on ENCODE]
GSM2467221 MCF-7 None Mammary Gland ESR1 [Search on ENCODE]
GSM2359459 RT112 Epithelium Urinary Bladder BRD4 [Search on ENCODE]
GSM2359451 PC-9 Lung Cancer Cell Lung BRD4 [Search on ENCODE]
GSM2797077 None None Breast FOXA1 [Search on ENCODE]
GSM2797078 None None Breast FOXA1 [Search on ENCODE]
GSM2670870 LTED None Breast ESR1 [Search on ENCODE]
GSM2644590 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM2797099 None None Breast ESR1 [Search on ENCODE]
GSM2797097 None None Breast ESR1 [Search on ENCODE]
GSM2644573 T47D Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM2644571 T47D Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM2797115 None None Breast ESR1 [Search on ENCODE]
GSM2278004 HCC70 Epithelium Breast STAT3 [Search on ENCODE]
GSM2278005 HCC70 Epithelium Breast STAT3 [Search on ENCODE]
GSM2644580 T47D Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM2350452 C4-2 None Prostate BRD4 [Search on ENCODE]
GSM2797143 None None Breast PR [Search on ENCODE]
GSM2797144 None None Breast PR [Search on ENCODE]
GSM2797108 None None Breast ESR1 [Search on ENCODE]
GSM2797122 None None Breast AR [Search on ENCODE]
GSM2644589 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM2537231 VCaP Epithelium Prostate HOXB13 [Search on ENCODE]
GSM2977010 None Keratinocyte None PRMT1 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.