Home
Virus
Gene
Disease
Dataset
Download
Help
 
HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 205611308-205611309 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM759666 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM759665 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM945520 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM945521 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM646465 NHEK Keratinocyte Skin H3K4me2 [Search on ENCODE]
GSM1102796 None None Fetal Adrenal Gland H3K4me1 [Search on ENCODE]
GSM1102793 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM997233 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM646383 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM809015 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM916066 None Adipocyte Adipose H3K27ac [Search on ENCODE]
GSM883659 None Epithelium Colon H3K4me1 [Search on ENCODE]
GSM1154045 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1154046 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM995353 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM995358 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM1056919 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1056955 None T Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM1214674 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1214675 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1214677 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1226370 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM1226371 None Endothelial Cell Umbilical Vein H3K27ac [Search on ENCODE]
GSM733769 GM12878 B Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM733654 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM1003535 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM733686 NHEK Keratinocyte Skin H3K4me2 [Search on ENCODE]
GSM1297966 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298007 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298039 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1333977 GM12878 B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1402792 MCF-7 Epithelium Breast H3R26Cit [Search on ENCODE]
GSM1517539 SK-N-MC None Brain H3K4me1 [Search on ENCODE]
GSM1420847 GM18862 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420890 GM18498 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1820939 TC-797 None None H3K27ac [Search on ENCODE]
GSM1853822 HEK293 Epithelium Embryonic Kidney H3K4me3 [Search on ENCODE]
GSM1645725 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1847870 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1847904 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1862993 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1915114 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM2042886 HT29 None Colon H3K27ac [Search on ENCODE]
GSM1574236 None None Pancreatic ductal H3K27ac [Search on ENCODE]
GSM1902615 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
ENCSR752UOD_1 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
ENCSR826UTD_1 PC-3 Epithelium Prostate H3K27ac [Search on ENCODE]
ENCSR826UTD_2 PC-3 Epithelium Prostate H3K27ac [Search on ENCODE]
GSM772734 None Haematopoietic Progenitor Cell Cord blood H3K4me1 [Search on ENCODE]
GSM2037499 None None Gastric Primary Sample H3K27ac [Search on ENCODE]
GSM2263027 None Monocyte Blood H3K27ac [Search on ENCODE]
GSM2262932 None Monocyte Blood H3K27ac [Search on ENCODE]
GSM2080914 C4-2B Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2058031 V1058 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM1907213 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1625973 None Macrophage Blood H3K4me1 [Search on ENCODE]
GSM1868869 C4-2B Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1816327 None Hematopoietic stem and progenitor cell None H3K4me1 [Search on ENCODE]
GSM1888684 None T Lymphocyte None H3K4me2 [Search on ENCODE]
GSM1888682 None T Lymphocyte None H3K4me2 [Search on ENCODE]
GSM1888764 None T Lymphocyte None H3K4me2 [Search on ENCODE]
GSM1888762 None T Lymphocyte None H3K4me2 [Search on ENCODE]
GSM2263052 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2263049 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2263033 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2263030 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2263029 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2263023 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2263021 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2263020 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2263013 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2263006 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2263002 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2262984 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2262983 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2262953 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2262950 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2262948 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2262928 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2357616 None Ewing sacroma None H3K4me1 [Search on ENCODE]
GSM2357600 None Ewing sacroma None H3K4me1 [Search on ENCODE]
GSM2265642 SF8628 None Pontine H3K4me1 [Search on ENCODE]
GSM2058078 V457 None None H3K4me1 [Search on ENCODE]
GSM2476259 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM2476258 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM1907212 LNCaP Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM772870 None Haematopoietic Progenitor Cell Cord blood H3K27ac [Search on ENCODE]
GSM2258748 ZR-75-1 None Breast H3K4me3 [Search on ENCODE]
GSM2258784 UACC812 None Breast H3K4me3 [Search on ENCODE]
GSM2258782 UACC812 None Breast H3K4me1 [Search on ENCODE]
GSM773043 None Haematopoietic Progenitor Cell Cord blood H3K4me1 [Search on ENCODE]
GSM2550240 None Endothelial Cell None H3K27ac [Search on ENCODE]
GSM2258694 76NF2V None Breast H3K4me3 [Search on ENCODE]
GSM2258776 UACC812 None Breast H3K27ac [Search on ENCODE]
GSM2723854 None Patient None H3K27ac [Search on ENCODE]
GSM2476343 SKmel147 melanoma None H3K4me1 [Search on ENCODE]
GSM2258713 MCF-10A Epithelium Breast H3K4me3 [Search on ENCODE]
GSM2550193 None Progenitor Cells None H3 [Search on ENCODE]
GSM2281658 None Leukemia Cell None H3K27ac [Search on ENCODE]
GSM2301910 IMEC Epithelium Breast H3K27ac [Search on ENCODE]
GSM2394405 JHU-06 Endothelial Cell None H3K27ac [Search on ENCODE]
GSM955982 None Endothelial Cell Umbilical Vein H3K4me1 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.