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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 234393510-234393553 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM566172 HeLa Epithelium Cervix H3K36me3 [Search on ENCODE]
GSM669898 HUES6 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM669892 HUES6 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM521890 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM706069 iPS DF 19.11 iPSC Foreskin H3K36me3 [Search on ENCODE]
GSM706070 iPS DF 6.9 iPSC None H3K36me3 [Search on ENCODE]
GSM686936 LNCaP Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM817241 None Fibroblast Foreskin H3K36me3 [Search on ENCODE]
GSM958159 None Keratinocyte Foreskin H3K36me3 [Search on ENCODE]
GSM910568 None None Stomach H3K36me3 [Search on ENCODE]
GSM910571 None None Spleen H3K36me3 [Search on ENCODE]
GSM910570 None None Pancreas H3K36me3 [Search on ENCODE]
GSM621693 None None Skeletal Muscle H3K36me3 [Search on ENCODE]
GSM1125769 None Epithelium Fetal Large Intestine H3K36me3 [Search on ENCODE]
GSM621646 None None Rectal Mucosa H3K36me3 [Search on ENCODE]
GSM621461 None Adipocyte Adipose H3K36me3 [Search on ENCODE]
GSM537699 None Hepatocyte Liver H3K36me3 [Search on ENCODE]
GSM1102788 None Monocyte Blood H3K36me3 [Search on ENCODE]
GSM646380 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM646383 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM646381 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM613876 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM956014 None Epithelium Lung H3K36me3 [Search on ENCODE]
GSM956012 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM956016 None None Sigmoid Colon H3K36me3 [Search on ENCODE]
GSM1013143 None None Ovary H3K36me3 [Search on ENCODE]
GSM1058772 None Epithelium Fetal Small Intestine H3K36me3 [Search on ENCODE]
GSM1058773 None None Fetal Muscle Leg H3K36me3 [Search on ENCODE]
GSM1058774 None T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1058771 None Epithelium Fetal Large Intestine H3K36me3 [Search on ENCODE]
GSM765962 None Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM1127180 None None Stomach H3K36me3 [Search on ENCODE]
GSM772803 None Neuron None H3K36me3 [Search on ENCODE]
GSM772851 None T Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM1055821 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1220567 None T Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM1233876 GM10847 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233877 GM10847 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233901 GM12878 B Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1233922 GM12890 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233923 GM12890 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233942 GM12891 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233943 GM12891 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233965 GM12892 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234016 GM18526 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234017 GM18526 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234034 GM18951 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234051 GM19099 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234067 GM19193 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234068 GM19193 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234087 GM19238 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234108 GM19239 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234109 GM19239 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234130 GM19240 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234131 GM19240 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234152 GM2255 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234170 GM2588 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234188 GM2610 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234206 GM2630 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1314124 KOPT-K1 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1314145 DND-41 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM999003 None T Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM999005 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1056919 None T Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1056946 None T Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM1003463 DND-41 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM945213 GM06990 B Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM945316 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM945184 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM945324 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM733654 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM733705 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM1003562 None Monocyte Blood H3K36me3 [Search on ENCODE]
GSM733721 None Osteoblast Bone H3K36me3 [Search on ENCODE]
GSM788076 U2OS None Bone H3K36me3B [Search on ENCODE]
GSM1252280 None None Stomach H3K36me3 [Search on ENCODE]
GSM1399013 NTKO Multiple myeloma cell None H3K36me3 [Search on ENCODE]
GSM1399017 None Multiple myeloma None H3K36me3 [Search on ENCODE]
GSM1479216 293T-Rex None None H3K36me3 [Search on ENCODE]
GSM1527831 LNCaP Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM1633751 None None Kidney H3K36me3 [Search on ENCODE]
GSM1922388 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1922390 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1922392 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1679107 LNCaP-abl Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM1679108 LNCaP-abl Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM1846882 None Patient derived xenograft cells None H3K27ac [Search on ENCODE]
GSM1846885 None Patient derived xenograft cells None H3K27ac [Search on ENCODE]
GSM1846889 None Patient derived xenograft cells None H3K27ac [Search on ENCODE]
GSM1527680 None Th1 None H3K27ac [Search on ENCODE]
GSM1527681 None Th2 None H3K27ac [Search on ENCODE]
GSM753432 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM818032 H1 Embryonic Stem Cell Embryo H3K27me3 [Search on ENCODE]
GSM818034 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM818035 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM1835900 TTC-549 Liver cell Liver H3K27ac [Search on ENCODE]
GSM772763 None Mesenchymal Stem Cell Adipose H3K36me3 [Search on ENCODE]
GSM772814 None None Cord blood H3K36me3 [Search on ENCODE]
GSM772818 None Mesenchymal Stem Cell Adipose H3K36me3 [Search on ENCODE]
GSM772820 None Mesenchymal Stem Cell Adipose H3K36me3 [Search on ENCODE]
GSM2406913 A549 Epithelium Lung H3K27ac [Search on ENCODE]
GSM772846 None iPSC None H3K36me3 [Search on ENCODE]
GSM1892652 None None FFPE H3K36me3 [Search on ENCODE]
GSM1892603 None None FFPE H3K36me3 [Search on ENCODE]
GSM1666383 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM1897375 MV4-11 Leukemia Cell None H3K36me3 [Search on ENCODE]
GSM2042912 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042911 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042910 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042909 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2228905 None Keratinocyte Foreskin H3K36me3 [Search on ENCODE]
GSM2228904 None Stem cell Foreskin H3K36me3 [Search on ENCODE]
GSM2279165 HEK293 Epithelium Embryonic Kidney H3K36me3 [Search on ENCODE]
GSM1948535 HEK293 Epithelium Embryonic Kidney H3K36me3 [Search on ENCODE]
GSM1835861 None None Kidney H3K36me3 [Search on ENCODE]
GSM2280000 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2279976 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2357615 None Ewing sacroma None H3K36me3 [Search on ENCODE]
GSM2370634 None resting Blood H2A [Search on ENCODE]
GSM2370632 None resting Blood H3K4me1 [Search on ENCODE]
GSM2214106 Rh4 rhabdomyosarcoma None H3K36me3 [Search on ENCODE]
GSM772865 None Haematopoietic Progenitor Cell Cord blood H3K36me3 [Search on ENCODE]
GSM2258744 ZR-75-1 None Breast H3K36me3 [Search on ENCODE]
GSM2258709 MCF-10A Epithelium Breast H3K36me3 [Search on ENCODE]
GSM2258708 MCF-10A Epithelium Breast H3K36me3 [Search on ENCODE]
GSM772982 None Inferior Temporal Lobe Cell Brain H3K36me3 [Search on ENCODE]
GSM2258780 UACC812 None Breast H3K36me3 [Search on ENCODE]
GSM2877986 MCF-7 Epithelium Breast H4K12ac [Search on ENCODE]
GSM2877987 MCF-7 Epithelium Breast H4K12ac [Search on ENCODE]
GSM773027 None iPSC None H3K36me3 [Search on ENCODE]
GSM773042 None Haematopoietic Progenitor Cell Cord blood H3K36me3 [Search on ENCODE]
GSM2947307 KG1 None Bone Marrow H3K36me3 [Search on ENCODE]
GSM2258691 76NF2V None Breast H3K36me3 [Search on ENCODE]
GSM2877989 MCF-7 Epithelium Breast H4K12ac [Search on ENCODE]
GSM2258798 SKBR-3 None Breast H3K36me3 [Search on ENCODE]
GSM2877995 MCF-7 Epithelium Breast H4K12ac [Search on ENCODE]
GSM2877994 MCF-7 Epithelium Breast H4K12ac [Search on ENCODE]
GSM2877991 MCF-7 Epithelium Breast H4K12ac [Search on ENCODE]
GSM2258817 AU565 None Breast H3K36me3 [Search on ENCODE]
GSM2258834 HCC1954 None Breast H3K36me3 [Search on ENCODE]
GSM2671298 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
GSM875813 LNCaP Epithelium Prostate H3K36me3 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.