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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 209704556-209704557 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM701538 None None Fetal Stomach DNase [Search on ENCODE]
GSM701534 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM701527 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM701524 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM701523 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM701512 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM665832 None Epithelium Lung DNase [Search on ENCODE]
GSM665828 None Epithelium Lung DNase [Search on ENCODE]
GSM665827 None Epithelium Lung DNase [Search on ENCODE]
GSM665808 None Epithelium Lung DNase [Search on ENCODE]
GSM665807 None Epithelium Lung DNase [Search on ENCODE]
GSM665806 None Epithelium Lung DNase [Search on ENCODE]
GSM665805 None Epithelium Lung DNase [Search on ENCODE]
GSM595930 None Epithelium Lung DNase [Search on ENCODE]
GSM595925 None Epithelium Lung DNase [Search on ENCODE]
GSM595924 None Epithelium Lung DNase [Search on ENCODE]
GSM595916 None Epithelium Lung DNase [Search on ENCODE]
GSM595915 None Epithelium Lung DNase [Search on ENCODE]
GSM1059534 None None Fetal Muscle Trunk DNase [Search on ENCODE]
GSM1059532 None None Fetal Stomach DNase [Search on ENCODE]
GSM646564 None Fibroblast Skin DNase [Search on ENCODE]
GSM646565 None Epithelium None DNase [Search on ENCODE]
GSM646560 None Epithelium Amnion DNase [Search on ENCODE]
GSM646561 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM909314 H1 Embryonic Stem Cell Embryo DNase [Search on ENCODE]
GSM909312 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM878630 None Epithelium Fetal Heart DNase [Search on ENCODE]
GSM906380 H1 Embryonic Stem Cell Embryo DNase [Search on ENCODE]
GSM1027318 None None Fetal Stomach DNase [Search on ENCODE]
GSM1027335 None None Pancreas DNase [Search on ENCODE]
GSM1027344 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM1027345 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM1027322 None Epithelium Fetal Heart DNase [Search on ENCODE]
GSM817175 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM817164 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM817168 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM817186 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM817174 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM817185 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM1014510 None Fibroblast Connective Tissue DNase [Search on ENCODE]
GSM1014512 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM1014518 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM1014527 AG10803 Fibroblast Skin DNase [Search on ENCODE]
GSM1014515 None Myocyte Heart DNase [Search on ENCODE]
GSM1014520 None Epithelium None DNase [Search on ENCODE]
GSM723023 None Epithelium Fetal Heart DNase [Search on ENCODE]
GSM723024 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM774227 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM774211 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM774218 None None Fetal Muscle Upper Trunk DNase [Search on ENCODE]
GSM774231 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM774206 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM774207 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM774237 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM849031 None Fibroblast Pulmonary Artery DNase [Search on ENCODE]
GSM849029 None Fibroblast Umbilical Vein DNase [Search on ENCODE]
GSM849028 None Fibroblast Lung DNase [Search on ENCODE]
GSM1220607 None None Fetal Skin Abdomen DNase [Search on ENCODE]
GSM736516 None Myocyte Heart DNase [Search on ENCODE]
GSM736541 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736628 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736555 None Fibroblast Pulmonary Artery DNase [Search on ENCODE]
GSM736574 None Fibroblast Lung DNase [Search on ENCODE]
GSM736503 None Fibroblast Lung DNase [Search on ENCODE]
GSM736491 None Fibroblast Connective Tissue DNase [Search on ENCODE]
GSM736520 NHDF-Ad Fibroblast Skin DNase [Search on ENCODE]
GSM736567 NHDF-Ad Fibroblast Skin DNase [Search on ENCODE]
GSM736498 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM736546 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM1406347 None Macrophage Blood DNase [Search on ENCODE]
GSM1443802 hMADS-3 Adipocyte Adipose DNase [Search on ENCODE]
GSM1566739 None Adipocyte None DNase [Search on ENCODE]
ENCSR759UNY_1 None None Tongue DNase [Search on ENCODE]
ENCSR405TXU_1 None Adipocyte None DNase [Search on ENCODE]
ENCSR405TXU_2 None Adipocyte None DNase [Search on ENCODE]
ENCSR475VQD_1 None None Brain DNase [Search on ENCODE]
GSM2243036 MOLM-14 acute myeloid leukemia (AML) cell line None ATAC-seq [Search on ENCODE]
GSM2544230 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544229 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2544228 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2544227 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544226 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544225 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2544224 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2544223 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544222 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544221 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2544220 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2544219 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544217 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2544216 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM1876024 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876027 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876021 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876022 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876028 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM2430672 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.