Home
Virus
Gene
Disease
Dataset
Download
Help
 
HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 153842340-153842341 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM729854 IB4 Lymphocyte Blood RBPJ [Search on ENCODE]
GSM729852 IB4 Lymphocyte Blood SND1 [Search on ENCODE]
GSM1033761 None Plasma Cell None MED1 [Search on ENCODE]
GSM1070124 MM1.S B Lymphocyte Blood BRD4 [Search on ENCODE]
GSM486288 GM15510 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM894108 MM1.S B Lymphocyte Blood MYC [Search on ENCODE]
GSM1153765 Mutu III B Lymphocyte None SND1 [Search on ENCODE]
GSM1038271 MM1.S B Lymphocyte Blood BRD4 [Search on ENCODE]
GSM1038272 MM1.S B Lymphocyte Blood BRD4 [Search on ENCODE]
GSM1121092 MM1.S B Lymphocyte Blood MED1 [Search on ENCODE]
GSM1121094 None B Lymphocyte Blood BRD4 [Search on ENCODE]
GSM1121098 None B Lymphocyte Blood CDK7 [Search on ENCODE]
GSM1121096 None B Lymphocyte Blood CDK7 [Search on ENCODE]
GSM1195560 None B Lymphocyte Blood IRF4 [Search on ENCODE]
GSM1195561 None Plasma Cell None BRD4 [Search on ENCODE]
GSM1195556 None B Lymphocyte Blood MED1 [Search on ENCODE]
GSM1233887 GM12878 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM1233911 GM12878 B Lymphocyte Blood STAG1 [Search on ENCODE]
GSM1233914 GM12890 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233931 GM12890 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233933 GM12891 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233953 GM12891 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233956 GM12892 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233975 GM12892 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234119 GM19239 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234122 GM19240 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234142 GM19240 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234178 GM2588 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234181 GM2610 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234196 GM2610 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234198 GM2630 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234214 GM2630 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234217 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234218 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234219 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234237 MS1 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234238 MS1 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1247823 MM1.S B Lymphocyte Blood BRD2 [Search on ENCODE]
GSM1247829 MM1.S B Lymphocyte Blood BRD3 [Search on ENCODE]
GSM1252090 MM1.S B Lymphocyte Blood CDK8 [Search on ENCODE]
GSM1273052 None B Lymphocyte None EBNA3C [Search on ENCODE]
GSM1273053 None B Lymphocyte None EBNA3C [Search on ENCODE]
GSM1302192 T47D-MTVL Epithelium Mammary Gland CDK2 [Search on ENCODE]
GSM935527 GM10847 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM935557 GM12878 B Lymphocyte Blood STAT3 [Search on ENCODE]
GSM935332 GM12878 B Lymphocyte Blood RAD21 [Search on ENCODE]
GSM935277 GM12878 B Lymphocyte Blood TBP [Search on ENCODE]
GSM935430 GM12878 B Lymphocyte Blood BHLHE40 [Search on ENCODE]
GSM935478 GM12878 B Lymphocyte Blood RELA [Search on ENCODE]
GSM935294 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM935442 GM12878 B Lymphocyte Blood IKZF1 [Search on ENCODE]
GSM935583 GM12878 B Lymphocyte Blood RCOR1 [Search on ENCODE]
GSM935541 GM12878 B Lymphocyte Blood JUND [Search on ENCODE]
GSM935375 GM12878 B Lymphocyte Blood EBF1 [Search on ENCODE]
GSM935562 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM935653 GM12878 B Lymphocyte Blood TBL1XR1 [Search on ENCODE]
GSM935283 GM12878 B Lymphocyte Blood MAZ [Search on ENCODE]
GSM935526 GM12891 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM935282 GM18505 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM935279 GM19193 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM803538 GM12878 B Lymphocyte Blood BATF [Search on ENCODE]
GSM1010779 GM12878 B Lymphocyte Blood NFATC1 [Search on ENCODE]
GSM1010881 GM12878 B Lymphocyte Blood NFIC [Search on ENCODE]
GSM1010780 GM12878 B Lymphocyte Blood ATF2 [Search on ENCODE]
GSM803534 GM12878 B Lymphocyte Blood POU2F2 [Search on ENCODE]
GSM803362 GM12878 B Lymphocyte Blood PAX5 [Search on ENCODE]
GSM803531 GM12878 B Lymphocyte Blood SPI1 [Search on ENCODE]
GSM803389 GM12878 B Lymphocyte Blood TCF12 [Search on ENCODE]
GSM803511 GM12878 B Lymphocyte Blood MEF2A [Search on ENCODE]
GSM803390 GM12878 B Lymphocyte Blood IRF4 [Search on ENCODE]
GSM803386 GM12878 B Lymphocyte Blood EBF1 [Search on ENCODE]
GSM803342 GM12878 B Lymphocyte Blood BCL3 [Search on ENCODE]
GSM1010893 GM12878 B Lymphocyte Blood RUNX3 [Search on ENCODE]
GSM1010731 GM12878 B Lymphocyte Blood FOXM1 [Search on ENCODE]
GSM803363 GM12878 B Lymphocyte Blood SP1 [Search on ENCODE]
GSM1010760 GM12878 B Lymphocyte Blood CREB1 [Search on ENCODE]
GSM803338 GM12878 B Lymphocyte Blood SIX5 [Search on ENCODE]
GSM1010771 GM12878 B Lymphocyte Blood PML [Search on ENCODE]
GSM803420 GM12878 B Lymphocyte Blood MEF2C [Search on ENCODE]
GSM1010729 GM12878 B Lymphocyte Blood MTA3 [Search on ENCODE]
GSM1010850 GM12878 B Lymphocyte Blood CEBPB [Search on ENCODE]
GSM803416 GM12878 B Lymphocyte Blood RAD21 [Search on ENCODE]
GSM803388 GM12878 B Lymphocyte Blood BCL11A [Search on ENCODE]
GSM803398 GM12891 Lymphoblastoid Blood SPI1 [Search on ENCODE]
GSM1072711 CAL-1 Dendritic Cell None TCF4 [Search on ENCODE]
GSM1290185 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM1290186 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM1333960 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM1333962 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM1333964 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM1333965 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM1333966 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM1334005 GM12878 B Lymphocyte Blood SPI1 [Search on ENCODE]
GSM1334006 GM12878 B Lymphocyte Blood SPI1 [Search on ENCODE]
GSM1334007 GM12878 B Lymphocyte Blood SPI1 [Search on ENCODE]
GSM1334008 GM12878 B Lymphocyte Blood SPI1 [Search on ENCODE]
GSM486278 GM18505 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM486316 GM12878 B Lymphocyte Blood RELA [Search on ENCODE]
GSM486317 GM12878 B Lymphocyte Blood RELA [Search on ENCODE]
GSM486323 GM12891 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM1519151 Ramos B Lymphocyte None NIPBL [Search on ENCODE]
GSM1519152 Ramos B Lymphocyte None NIPBL [Search on ENCODE]
GSM1703900 None B Lymphocyte None SPI1 [Search on ENCODE]
GSM1703922 None B Lymphocyte None SPI1 [Search on ENCODE]
GSM558633 GM10855 Lymphocyte Blood VDR [Search on ENCODE]
GSM558632 GM10855 Lymphocyte Blood VDR [Search on ENCODE]
GSM558631 GM10855 Lymphocyte Blood VDR [Search on ENCODE]
GSM558630 GM10855 Lymphocyte Blood VDR [Search on ENCODE]
GSM558637 GM10861 Lymphocyte Blood VDR [Search on ENCODE]
GSM558636 GM10861 Lymphocyte Blood VDR [Search on ENCODE]
GSM558634 GM10861 Lymphocyte Blood VDR [Search on ENCODE]
GSM1958039 LCL Lymphoblastoid Blood EBF1 [Search on ENCODE]
GSM1958041 LCL Lymphoblastoid Blood RBPJ [Search on ENCODE]
ENCSR207PFI_1 GM12878 B Lymphocyte Blood ZBED1 [Search on ENCODE]
ENCSR293QAR_1 GM12878 B Lymphocyte Blood MTA2 [Search on ENCODE]
ENCSR293QAR_2 GM12878 B Lymphocyte Blood MTA2 [Search on ENCODE]
ENCSR372GIN_1 GM12878 B Lymphocyte Blood CBX5 [Search on ENCODE]
ENCSR372GIN_2 GM12878 B Lymphocyte Blood CBX5 [Search on ENCODE]
ENCSR412QBS_1 GM12878 B Lymphocyte Blood TARDBP [Search on ENCODE]
ENCSR412QBS_2 GM12878 B Lymphocyte Blood TARDBP [Search on ENCODE]
ENCSR739IHN_1 GM12878 B Lymphocyte Blood TBX21 [Search on ENCODE]
ENCSR739IHN_2 GM12878 B Lymphocyte Blood TBX21 [Search on ENCODE]
ENCSR835XKS_1 GM12878 B Lymphocyte Blood TRIM22 [Search on ENCODE]
ENCSR835XKS_2 GM12878 B Lymphocyte Blood TRIM22 [Search on ENCODE]
ENCSR860UHK_1 GM12878 B Lymphocyte Blood CBFB [Search on ENCODE]
ENCSR860UHK_2 GM12878 B Lymphocyte Blood CBFB [Search on ENCODE]
ENCSR874AFU_1 GM12878 B Lymphocyte Blood IKZF1 [Search on ENCODE]
ENCSR874AFU_2 GM12878 B Lymphocyte Blood IKZF1 [Search on ENCODE]
ENCSR897MMC_1 GM12878 B Lymphocyte Blood JUNB [Search on ENCODE]
ENCSR897MMC_2 GM12878 B Lymphocyte Blood JUNB [Search on ENCODE]
ENCSR936XTK_2 GM12878 B Lymphocyte Blood ZNF143 [Search on ENCODE]
GSM2026739 HEK293 Epithelium Embryonic Kidney FEZF1 [Search on ENCODE]
GSM754331 GM12878 B Lymphocyte Blood JUND [Search on ENCODE]
GSM2095825 BJAB GCB DLBCL cells None BIRA [Search on ENCODE]
GSM803509 GM12878 B Lymphocyte Blood BCLAF1 [Search on ENCODE]
GSM2302873 MM1.S B Lymphocyte Blood HDAC2 [Search on ENCODE]
GSM2302871 MM1.S B Lymphocyte Blood HDAC3 [Search on ENCODE]
GSM2302870 MM1.S B Lymphocyte Blood HDAC4 [Search on ENCODE]
GSM2302869 MM1.S B Lymphocyte Blood HDAC1 [Search on ENCODE]
GSM1975020 Gen2.2 Plasmacytoid dendritic cell None TCF4 [Search on ENCODE]
GSM1975018 CAL-1 Plasmacytoid dendritic cell None TCF4 [Search on ENCODE]
GSM2386723 None B Lymphocyte Tonsil CREBBP [Search on ENCODE]
GSM2386721 None B Lymphocyte Tonsil CREBBP [Search on ENCODE]
GSM2574796 GM12878 B Lymphocyte Blood ETV6 [Search on ENCODE]
GSM2574791 GM12878 B Lymphocyte Blood BATF3 [Search on ENCODE]
GSM2302875 MM1.S B Lymphocyte Blood CCND2 [Search on ENCODE]
GSM2574792 GM12878 B Lymphocyte Blood HMG20A [Search on ENCODE]
GSM2401446 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401466 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401469 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2443455 LCL B Lymphocyte None SMC1A [Search on ENCODE]
GSM2443454 LCL B Lymphocyte None NIPBL [Search on ENCODE]
GSM2443458 LCL B Lymphocyte None MED1 [Search on ENCODE]
GSM2643540 LCL Lymphoblastoid Blood BRD4 [Search on ENCODE]
GSM2430675 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.