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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 153842340-153842341 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM621741 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM894084 MM1.S B Lymphocyte Blood H3K4me3 [Search on ENCODE]
GSM1033758 None Plasma Cell None H3K4me3 [Search on ENCODE]
GSM621686 None None Skeletal Muscle H3K4me1 [Search on ENCODE]
GSM621418 None Adipocyte Adipose H3K4me1 [Search on ENCODE]
GSM916064 None None Skeletal Muscle H3K27ac [Search on ENCODE]
GSM621442 None Mesenchymal Stem Cell Bone Marrow H3K9ac [Search on ENCODE]
GSM1154047 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1233905 GM12878 B Lymphocyte Blood H3K4me3 [Search on ENCODE]
GSM1233969 GM12892 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1234080 GM19238 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234155 GM2255 Lymphoblastoid Blood H3K4me3 [Search on ENCODE]
GSM1254196 HBL1 B Lymphocyte Bone Marrow H3K27ac [Search on ENCODE]
GSM1254198 OCI-Ly3 B Lymphocyte Bone Marrow H3K27ac [Search on ENCODE]
GSM1254202 Toledo B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM733710 None Astrocyte Brain H3K4me1 [Search on ENCODE]
GSM733779 None Osteoblast Bone H3K4me2 [Search on ENCODE]
GSM733739 None Osteoblast Bone H3K27ac [Search on ENCODE]
GSM733704 None Osteoblast Bone H3K4me1 [Search on ENCODE]
GSM1297933 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297949 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297976 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1297988 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1298027 None T Lymphocyte Blood H3K4me2 [Search on ENCODE]
GSM1418961 IMR90 Fibroblast Lung H3K4me1 [Search on ENCODE]
GSM1519153 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519154 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519155 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519156 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519157 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519158 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519159 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519161 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519163 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519164 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519167 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519171 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519173 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519180 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519182 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519183 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519184 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519186 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519187 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519188 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519191 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519192 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519193 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519194 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519195 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519196 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519197 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1519198 Ramos B Lymphocyte None H3K4me3 [Search on ENCODE]
GSM1663035 IOE11 Epithelium Ovary H3K27ac [Search on ENCODE]
GSM1663036 IOE11 Epithelium Ovary H3K27ac [Search on ENCODE]
GSM1550861 GM18520 Lymphoblastoid None H3K4me3 [Search on ENCODE]
GSM1550864 GM18520 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550947 GM18498 Lymphoblastoid None H3K4me3 [Search on ENCODE]
GSM1645702 OCI-Ly1 B cell lymphoma Bone Marrow H3K4me2 [Search on ENCODE]
GSM1645704 OCI-Ly1 B cell lymphoma Bone Marrow H3K4me2 [Search on ENCODE]
GSM1703895 None B Lymphocyte None H3K27ac [Search on ENCODE]
GSM1703905 None B Lymphocyte None H3K27ac [Search on ENCODE]
GSM1703909 KARPAS-422 B Lymphocyte None H3K27ac [Search on ENCODE]
GSM1703918 None B Lymphocyte None H3K27ac [Search on ENCODE]
GSM1703925 None B Lymphocyte None H3K27ac [Search on ENCODE]
GSM1703931 Toledo B Lymphocyte Blood H3K27ac [Search on ENCODE]
GSM1648033 None B Lymphocyte Tonsil H3K4me1 [Search on ENCODE]
GSM1702539 None None Cord blood H3 [Search on ENCODE]
GSM1702578 None None Bone Marrow H3 [Search on ENCODE]
GSM1915114 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM2098177 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
ENCSR758OEC_2 MM.1S B Lymphoblast Blood H3K27ac [Search on ENCODE]
ENCSR955IXZ_2 KMS11 None None H3K27ac [Search on ENCODE]
GSM772748 None Mesenchymal Stem Cell Adipose H3K4me1 [Search on ENCODE]
GSM772762 None Mesenchymal Stem Cell Adipose H3K4me1 [Search on ENCODE]
GSM2386722 None B Lymphocyte Tonsil H3K27ac [Search on ENCODE]
GSM2386720 None B Lymphocyte Tonsil H3K27ac [Search on ENCODE]
GSM2435531 MO1043 None Chronic Lymphocytic Leukemia (CLL) cell line H3K27ac [Search on ENCODE]
GSM2040746 GM12878 Lymphoblastoid None H3K27me3 [Search on ENCODE]
GSM2550233 None Progenitor Cells None H3K27ac [Search on ENCODE]
GSM1915005 MG-63 Osteosarcoma cell None H3K27ac [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.