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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 224287680-224287804 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM706064 H9 Embryonic Stem Cell Embryo H3K18ac [Search on ENCODE]
GSM605314 H9 Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM669954 HUES48 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM669898 HUES6 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM669892 HUES6 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM669885 HUES6 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM669966 HUES64 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM706073 iPS DF 6.9 iPSC None H3K4me1 [Search on ENCODE]
GSM621423 iPS-20b iPSC None H3K4me3 [Search on ENCODE]
GSM686936 LNCaP Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM772785 None Neuron None H3K4me1 [Search on ENCODE]
GSM894066 H128 Epithelium Lung H3K27ac [Search on ENCODE]
GSM894067 H2171 Epithelium Lung H3K27ac [Search on ENCODE]
GSM817241 None Fibroblast Foreskin H3K36me3 [Search on ENCODE]
GSM817238 None Fibroblast Foreskin H3K36me3 [Search on ENCODE]
GSM958152 None Melanocyte Foreskin H3K4me1 [Search on ENCODE]
GSM958159 None Keratinocyte Foreskin H3K36me3 [Search on ENCODE]
GSM773008 None None Cingulate Gyrus H3K4me3 [Search on ENCODE]
GSM910568 None None Stomach H3K36me3 [Search on ENCODE]
GSM910567 None None Esophagus H3K36me3 [Search on ENCODE]
GSM910571 None None Spleen H3K36me3 [Search on ENCODE]
GSM910566 None None Aorta H3K36me3 [Search on ENCODE]
GSM910570 None None Pancreas H3K36me3 [Search on ENCODE]
GSM621684 None None Skeletal Muscle H3K36me3 [Search on ENCODE]
GSM1125769 None Epithelium Fetal Large Intestine H3K36me3 [Search on ENCODE]
GSM621656 None None Muscle H3K36me3 [Search on ENCODE]
GSM621649 None None Fetal Stomach H3K36me3 [Search on ENCODE]
GSM621446 None Adipocyte Adipose H3K36me3 [Search on ENCODE]
GSM621387 None Epithelium Lung H3K36me3 [Search on ENCODE]
GSM537699 None Hepatocyte Liver H3K36me3 [Search on ENCODE]
GSM714808 None Neural crest cell Cranial H3K4me1 [Search on ENCODE]
GSM997249 HUES64 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM997258 None Substantia Nigra Cell Brain H3K27ac [Search on ENCODE]
GSM997254 None Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM997250 HUES48 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM646344 H1 Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM646342 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM956014 None Epithelium Lung H3K36me3 [Search on ENCODE]
GSM956012 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM956008 H1 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1013146 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1013142 None None Thymus H3K36me3 [Search on ENCODE]
GSM1120348 None None Spleen H3K36me3 [Search on ENCODE]
GSM529971 None Cortex Prefrontal H3K4me3 [Search on ENCODE]
GSM916035 None Hippocampus Middle Cell Brain H3K27ac [Search on ENCODE]
GSM916021 None Neural Progenitor Cell Brain H2A [Search on ENCODE]
GSM916040 None Hippocampus Middle Cell Brain H3K4me3 [Search on ENCODE]
GSM1058773 None None Fetal Muscle Leg H3K36me3 [Search on ENCODE]
GSM1058771 None Epithelium Fetal Large Intestine H3K36me3 [Search on ENCODE]
GSM1112824 None Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1112811 None None Brain H3K27ac [Search on ENCODE]
GSM1112812 None Inferior Temporal Lobe Cell Brain H3K27ac [Search on ENCODE]
GSM1112813 None None Cingulate Gyrus H3K27ac [Search on ENCODE]
GSM1112830 HUES64 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1112829 None Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1112831 HUES64 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1112828 HUES64 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1112810 None None Mid Frontal Lobe H3K27ac [Search on ENCODE]
GSM908957 H1 Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM806940 None None Brain H3K4me3 [Search on ENCODE]
GSM1127080 UCSF-4* Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM772808 None Neural Progenitor Cell Brain H3K4me1 [Search on ENCODE]
GSM1055820 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1055821 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1272755 BG01 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1272767 WIBR3 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1273643 H7 Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM1273645 H7 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1273660 None Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1273663 None Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM1273665 None Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1314124 KOPT-K1 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1314131 KOPT-K1 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM945207 BJ Fibroblast Skin H3K36me3 [Search on ENCODE]
GSM1003463 DND-41 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM945213 GM06990 B Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM733782 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM733670 H1 Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM733718 H1 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM945316 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM945233 None Endothelial Cell Umbilical Vein H3K36me3 [Search on ENCODE]
GSM1003562 None Monocyte Blood H3K36me3 [Search on ENCODE]
GSM945174 NHEK Keratinocyte Skin H3K36me3 [Search on ENCODE]
GSM788083 NT2-D1 None Embryo H3K4me1 [Search on ENCODE]
GSM945226 SAEC Epithelium Lung H3K36me3 [Search on ENCODE]
GSM1294051 T47D-MTVL Epithelium Mammary Gland H3K27me3 [Search on ENCODE]
GSM1399013 NTKO Multiple myeloma cell None H3K36me3 [Search on ENCODE]
GSM1399017 None Multiple myeloma None H3K36me3 [Search on ENCODE]
GSM1399262 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1399263 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1521735 None Neural Progenitor Cell None H3K27ac [Search on ENCODE]
GSM1521755 None Neural Progenitor Cell None H3K27ac [Search on ENCODE]
GSM1526505 None None Prefrontal H3K4me3 [Search on ENCODE]
GSM1571903 LIS2 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1316302 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1316303 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1633742 None None Kidney H3K36me3 [Search on ENCODE]
GSM1825765 None Intermediate None H3K4me2 [Search on ENCODE]
GSM1825769 None Intermediate None H3K4me2 [Search on ENCODE]
GSM1653249 HEK293 Epithelium Embryonic Kidney H3K4me3 [Search on ENCODE]
GSM1817155 None Neural crest cell Cranial H3K27ac [Search on ENCODE]
GSM1922388 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1922390 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1922392 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1922394 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1679107 LNCaP-abl Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM1679108 LNCaP-abl Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM1660038 None None Brain H3K27ac [Search on ENCODE]
GSM1660039 None None Brain H3K27ac [Search on ENCODE]
GSM1660042 None None Brain H3K27ac [Search on ENCODE]
GSM1660045 None None Brain H3K27ac [Search on ENCODE]
GSM1660051 None Cortex Prefrontal H3K27ac [Search on ENCODE]
GSM1831748 WIBR3 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1831752 WIBR3 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1831753 WIBR3 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1831755 WIBR3 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
ENCSR092TTO_2 None Glial Cell None H3K27ac [Search on ENCODE]
ENCSR092TTO_3 None Glial Cell None H3K27ac [Search on ENCODE]
ENCSR301AEA_1 None Neuron None H3K4me1 [Search on ENCODE]
ENCSR301AEA_2 None Neuron None H3K4me1 [Search on ENCODE]
ENCSR531QHM_1 None Neuron None H3K9ac [Search on ENCODE]
GSM752965 iPS DF 19.11 iPSC Foreskin H3K27ac [Search on ENCODE]
GSM752973 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM752986 IMR90 Fibroblast Lung H3K9me1 [Search on ENCODE]
ENCSR645BCH_1 None Neural Progenitor Cell None H3K4me2 [Search on ENCODE]
ENCSR645BCH_2 None Neural Progenitor Cell None H3K4me2 [Search on ENCODE]
ENCSR821IAK_1 None Neuron None H3K4me2 [Search on ENCODE]
ENCSR821IAK_2 None Neuron None H3K4me2 [Search on ENCODE]
ENCSR842NGQ_2 None Stem cell None H3K27ac [Search on ENCODE]
ENCSR842NGQ_5 None Stem cell None H3K27ac [Search on ENCODE]
ENCSR905TYC_1 None Neuron None H3K27ac [Search on ENCODE]
ENCSR905TYC_2 None Neuron None H3K27ac [Search on ENCODE]
GSM818031 H1 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM818039 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM818040 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM2072643 None Neuron Fetal Brain H3K27ac [Search on ENCODE]
GSM2072642 None Neuron Fetal Brain H3K27ac [Search on ENCODE]
GSM772767 None iPSC None H3K4me1 [Search on ENCODE]
GSM772778 None None Brain H3K9ac [Search on ENCODE]
GSM772789 hES I3 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1922973 None Neurosphere None H3K27ac [Search on ENCODE]
GSM1922972 None Neurosphere None H3K27ac [Search on ENCODE]
GSM1922971 None Neurosphere None H3K27ac [Search on ENCODE]
GSM772793 HUES48 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM772798 HUES48 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM772800 HUES64 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM772820 None Mesenchymal Stem Cell Adipose H3K36me3 [Search on ENCODE]
GSM772825 None Mesenchymal Stem Cell Bone Marrow H3K36me3 [Search on ENCODE]
GSM772832 None None Brain H3K27ac [Search on ENCODE]
GSM772843 None iPSC None H3K9ac [Search on ENCODE]
GSM772844 None iPSC None H3K4me3 [Search on ENCODE]
GSM772845 None iPSC None H3K4me1 [Search on ENCODE]
GSM772846 None iPSC None H3K36me3 [Search on ENCODE]
GSM1922078 None Free cell None H3K27ac [Search on ENCODE]
GSM2046851 None Mesenchymal Stem Cell Umbilical Cord H3K36me3 [Search on ENCODE]
GSM1846901 None Patient derived xenograft cells None H3K4me1 [Search on ENCODE]
GSM1831756 None Neuron None H3K4me1 [Search on ENCODE]
GSM2042912 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042911 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042910 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2042909 HT29 colorectal adenocarcinoma None H3K36me3 [Search on ENCODE]
GSM2228905 None Keratinocyte Foreskin H3K36me3 [Search on ENCODE]
GSM2228904 None Stem cell Foreskin H3K36me3 [Search on ENCODE]
GSM1835861 None None Kidney H3K36me3 [Search on ENCODE]
GSM2442787 None Endothelial Cell Umbilical Vein H3K4me1 [Search on ENCODE]
GSM2280000 None Cardiomyocyte None H3K36me3 [Search on ENCODE]
GSM2029365 H9 Embryonic Stem Cell Embryo H3K4me3 [Search on ENCODE]
GSM2029357 H9 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM2029355 H9 Embryonic Stem Cell Embryo H3K4me3 [Search on ENCODE]
GSM2258709 MCF-10A Epithelium Breast H3K36me3 [Search on ENCODE]
GSM772996 None Inferior Temporal Lobe Cell Brain H3K4me3 [Search on ENCODE]
GSM773022 None Hippocampus Middle Cell Brain H3K4me3 [Search on ENCODE]
GSM773028 None iPSC None H3K4me1 [Search on ENCODE]
GSM773029 None iPSC None H3K4me3 [Search on ENCODE]
GSM773030 None iPSC None H3K9ac [Search on ENCODE]
GSM773033 None iPSC None H3K27ac [Search on ENCODE]
GSM773042 None Haematopoietic Progenitor Cell Cord blood H3K36me3 [Search on ENCODE]
GSM2550249 None Stem cell None H3 [Search on ENCODE]
GSM2550207 None Stem cell None H3 [Search on ENCODE]
GSM2258691 76NF2V None Breast H3K36me3 [Search on ENCODE]
GSM2550228 None Stem cell None H3 [Search on ENCODE]
GSM2550226 None Stem cell None H3K27ac [Search on ENCODE]
GSM2550221 None Stem cell None H3 [Search on ENCODE]
GSM466737 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM2550186 None Stem cell None H3 [Search on ENCODE]
GSM537679 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM434762 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM466739 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM602261 H1 Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM602260 H1 Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM605323 H1 Embryonic Stem Cell Embryo H3K9ac [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.