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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 43345294-43345295 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM701531 None Epithelium Fetal Large Intestine DNase [Search on ENCODE]
GSM701530 None Epithelium Fetal Small Intestine DNase [Search on ENCODE]
GSM701495 None Epithelium Fetal Large Intestine DNase [Search on ENCODE]
GSM701490 None Epithelium Fetal Large Intestine DNase [Search on ENCODE]
GSM665835 None Epithelium Small Intestine DNase [Search on ENCODE]
GSM665830 None Epithelium Fetal Heart DNase [Search on ENCODE]
GSM665798 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM595919 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM595918 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM595917 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM595914 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530664 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530663 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530661 None Epithelium Fetal Heart DNase [Search on ENCODE]
GSM530660 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530659 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530658 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530657 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530652 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM493387 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM493386 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM493384 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM623516 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM817220 None Epithelium Fetal Heart DNase [Search on ENCODE]
GSM1059529 None None Cord blood DNase [Search on ENCODE]
GSM646567 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM878630 None Epithelium Fetal Heart DNase [Search on ENCODE]
GSM1027327 None Epithelium Fetal Small Intestine DNase [Search on ENCODE]
GSM1014514 None Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM723022 None Haematopoietic Progenitor Cell Cord blood DNase [Search on ENCODE]
GSM774203 None Epithelium Fetal Heart DNase [Search on ENCODE]
GSM774225 None Epithelium Fetal Small Intestine DNase [Search on ENCODE]
GSM774229 None Epithelium Fetal Small Intestine DNase [Search on ENCODE]
GSM774228 None Epithelium Fetal Large Intestine DNase [Search on ENCODE]
GSM774208 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM1102739 None Epithelium Small Intestine DNase [Search on ENCODE]
GSM1024770 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM736566 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM736629 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM1024771 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1024756 NHBE_RA Epithelium Bronchia DNase [Search on ENCODE]
GSM1406342 None Macrophage Blood DNase [Search on ENCODE]
GSM1443801 hMADS-3 Adipocyte Adipose DNase [Search on ENCODE]
GSM1581820 None Stem cell Blood DNase [Search on ENCODE]
GSM1581823 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581834 None Myeloid Cell None DNase [Search on ENCODE]
GSM1782765 K562 Erythroblast Bone Marrow ATAC-seq [Search on ENCODE]
ENCSR148VUP_1 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR148VUP_2 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR346IHH_1 Daoy Polygonal Cerebellum DNase [Search on ENCODE]
ENCSR426IEA_2 KBM-7 Myeloblast Blood DNase [Search on ENCODE]
ENCSR564JUY_1 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR564JUY_2 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR845CFB_1 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR845CFB_2 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR932KWJ_2 A-172 Glial Cell Brain DNase [Search on ENCODE]
ENCSR167DFU_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR167DFU_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR627GNV_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR627GNV_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR101TGA_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR101TGA_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR154AVE_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR154AVE_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR141VJJ_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR636VCX_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR636VCX_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR374YBC_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR374YBC_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR622RJN_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR744QGM_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR997TXZ_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR048BUO_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR064EFK_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR087QUG_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR215FCQ_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR274JIR_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR485CIR_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR527IGO_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR560CCF_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR561XZU_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR605SNG_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR632CQZ_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR643OAB_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR724SCF_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR815JAA_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR818YUC_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR826CTO_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR873PLF_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR901BRM_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR945ENZ_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR967DXR_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM816655 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM2326844 None t(3;21) paitent None DNase [Search on ENCODE]
GSM2326845 None Plasmablast None DNase [Search on ENCODE]
GSM2326846 SKH1 SKH-1 cells None DNase [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.