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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 10280459-10281096 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM621759 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM621752 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM621741 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM521883 IMR90 Fibroblast Lung H3K14ac [Search on ENCODE]
GSM521881 IMR90 Fibroblast Lung H3K14ac [Search on ENCODE]
GSM521884 IMR90 Fibroblast Lung H3K18ac [Search on ENCODE]
GSM469965 IMR90 Fibroblast Lung H3K18ac [Search on ENCODE]
GSM469967 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM469966 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM521893 IMR90 Fibroblast Lung H3K4ac [Search on ENCODE]
GSM521897 IMR90 Fibroblast Lung H3K4me1 [Search on ENCODE]
GSM521895 IMR90 Fibroblast Lung H3K4me1 [Search on ENCODE]
GSM521900 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM521899 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM521912 IMR90 Fibroblast Lung H3K9ac [Search on ENCODE]
GSM521915 IMR90 Fibroblast Lung H4K20me1 [Search on ENCODE]
GSM521918 IMR90 Fibroblast Lung H4K5ac [Search on ENCODE]
GSM469975 IMR90 Fibroblast Lung H4K5ac [Search on ENCODE]
GSM521922 IMR90 Fibroblast Lung H4K8ac [Search on ENCODE]
GSM894071 U87 None Brain H3K4me3 [Search on ENCODE]
GSM534482 None Stromal Cell Adipose H3K27ac [Search on ENCODE]
GSM534475 None Stromal Cell Adipose H3K27ac [Search on ENCODE]
GSM534468 None Stromal Cell Adipose H3K27ac [Search on ENCODE]
GSM910575 None None Left Ventricle H3K4me1 [Search on ENCODE]
GSM646401 None Myoblast Skeletal Muscle H3K4me1 [Search on ENCODE]
GSM873694 IMR90 Fibroblast Lung H3 [Search on ENCODE]
GSM534488 None Stromal Cell Adipose H3K4me1 [Search on ENCODE]
GSM534481 None Stromal Cell Adipose H3K4me1 [Search on ENCODE]
GSM534474 None Stromal Cell Adipose H3K4me1 [Search on ENCODE]
GSM670024 None Chondrocyte Cartilage H3K4me1 [Search on ENCODE]
GSM670000 None Chondrocyte Cartilage H3K4me1 [Search on ENCODE]
GSM669980 None Mesenchymal Stem Cell Bone Marrow H3K4me1 [Search on ENCODE]
GSM669927 None Chondrocyte Cartilage H3K4me1 [Search on ENCODE]
GSM669911 None Mesenchymal Stem Cell Bone Marrow H3K4me1 [Search on ENCODE]
GSM621418 None Adipocyte Adipose H3K4me1 [Search on ENCODE]
GSM621409 None Epithelium Kidney H3K4me1 [Search on ENCODE]
GSM906392 None None Aorta H3K27ac [Search on ENCODE]
GSM621402 None Mesenchymal Stem Cell Bone Marrow H3K4me1 [Search on ENCODE]
GSM534480 None Stromal Cell Adipose H3K4me2 [Search on ENCODE]
GSM534473 None Stromal Cell Adipose H3K4me2 [Search on ENCODE]
GSM534466 None Stromal Cell Adipose H3K4me2 [Search on ENCODE]
GSM534472 None Stromal Cell Adipose H3K4me3 [Search on ENCODE]
GSM916058 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112787 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112797 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112792 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112793 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112798 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM621458 None Adipocyte Adipose H3K4me3 [Search on ENCODE]
GSM621422 None Mesenchymal Stem Cell Bone Marrow H3K4me3 [Search on ENCODE]
GSM1127076 None Fibroblast Foreskin H3K27ac [Search on ENCODE]
GSM1055820 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1154047 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1164203 GM18505 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1233925 GM12890 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1233944 GM12891 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1010912 AG04450 Fibroblast Fetal Lung H3K27ac [Search on ENCODE]
GSM945324 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM945290 None Epithelium Mammary Gland H3K4me3 [Search on ENCODE]
GSM733710 None Astrocyte Brain H3K4me1 [Search on ENCODE]
GSM1003533 None Astrocyte Brain H3K4me2 [Search on ENCODE]
GSM733763 None Astrocyte Brain H3K27ac [Search on ENCODE]
GSM1003526 NHDF-Ad Fibroblast Skin H3K4me1 [Search on ENCODE]
GSM733650 NHDF-Ad Fibroblast Skin H3K4me3 [Search on ENCODE]
GSM733753 NHDF-Ad Fibroblast Skin H3K4me2 [Search on ENCODE]
GSM733781 NHLF Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM733779 None Osteoblast Bone H3K4me2 [Search on ENCODE]
GSM733704 None Osteoblast Bone H3K4me1 [Search on ENCODE]
GSM1399018 None Multiple myeloma None H3K27me3 [Search on ENCODE]
GSM1435528 None Fibroblast None H3K4me1 [Search on ENCODE]
GSM1418961 IMR90 Fibroblast Lung H3K4me1 [Search on ENCODE]
GSM1418962 IMR90 Fibroblast Lung H3K4me1 [Search on ENCODE]
GSM1418963 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1418964 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1526934 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1526935 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1527825 LNCaP Epithelium Prostate H3ac [Search on ENCODE]
GSM1327357 None Macrophage None H3K27ac [Search on ENCODE]
GSM1550824 GM19206 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550887 GM18502 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550900 GM18916 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1551003 None Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1551019 GM19159 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1866085 None None Brain H3K4me1 [Search on ENCODE]
GSM1866091 None None Brain H3K4me1 [Search on ENCODE]
GSM1866095 None None Brain H3K4me1 [Search on ENCODE]
GSM1866099 None None Brain H3K4me1 [Search on ENCODE]
GSM1866128 None None Brain H3K4me1 [Search on ENCODE]
GSM1866700 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM1679107 LNCaP-abl Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM1904603 None Cortex Embryonic Kidney H3K27ac [Search on ENCODE]
GSM2046840 None Mesenchymal Stem Cell Umbilical Cord H3K27ac [Search on ENCODE]
GSM1663098 None Hematopoietic Stem Cell Liver H3K27ac [Search on ENCODE]
GSM1970523 None Cortex Kidney H3K27ac [Search on ENCODE]
ENCSR007YOT_1 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR007YOT_2 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR007YOT_3 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR007YOT_4 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR124MTJ_1 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR124MTJ_3 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR479HKJ_2 None Fibroblast None H3K4me3 [Search on ENCODE]
ENCSR564IGJ_1 SK-N-SH Neuroblastoma cell Brain H3K27ac [Search on ENCODE]
ENCSR564IGJ_2 SK-N-SH Neuroblastoma cell Brain H3K27ac [Search on ENCODE]
GSM752986 IMR90 Fibroblast Lung H3K9me1 [Search on ENCODE]
GSM752987 IMR90 Fibroblast Lung H3K9me1 [Search on ENCODE]
GSM753432 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM753437 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
ENCSR726ZZX_1 ACC112 None None H3K4me1 [Search on ENCODE]
GSM818017 IMR90 Fibroblast Lung H2BK5ac [Search on ENCODE]
ENCSR906NGD_4 None Fibroblast None H3K4me1 [Search on ENCODE]
GSM832837 IMR90 Fibroblast Lung H2BK5ac [Search on ENCODE]
GSM832838 IMR90 Fibroblast Lung H2BK5ac [Search on ENCODE]
GSM864035 H1 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM772747 None Mesenchymal Stem Cell Adipose H3K4me3 [Search on ENCODE]
GSM772761 None Mesenchymal Stem Cell Adipose H3K4me3 [Search on ENCODE]
GSM1970132 MRC5 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM772816 None Mesenchymal Stem Cell Adipose H3K4me1 [Search on ENCODE]
GSM2467308 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM2214085 CTR rhabdomyosarcoma None H3K27ac [Search on ENCODE]
GSM2214082 7250 Fibroblast None H3K27ac [Search on ENCODE]
GSM2214081 7250 Fibroblast None H3K27ac [Search on ENCODE]
GSM2035816 NHEK Keratinocyte Skin H3K27ac [Search on ENCODE]
GSM1888688 None T Lymphocyte None H3K4me2 [Search on ENCODE]
GSM1615879 None Fibroblast Skin H1.4 [Search on ENCODE]
GSM2067519 MCF-7 None Breast H3K4me1 [Search on ENCODE]
GSM2067517 MCF-7 None Breast H3K4me1 [Search on ENCODE]
GSM2357608 None Ewing sacroma None H3K4me1 [Search on ENCODE]
GSM2308931 None hTERT immortalized endometriosis cells None H3K4me1 [Search on ENCODE]
GSM1422953 None Melanocytic cell None H3K4me1 [Search on ENCODE]
GSM1422917 None Melanocytic cell None H3K4me1 [Search on ENCODE]
GSM2550214 None Fibroblast None H3 [Search on ENCODE]
GSM2550212 None Fibroblast None H3K27ac [Search on ENCODE]
GSM2151909 None Fibroblast Skin H3K27ac [Search on ENCODE]
GSM2151908 None Fibroblast Skin H3K27ac [Search on ENCODE]
GSM2870638 None osteosarcoma None H3K27ac [Search on ENCODE]
GSM2394410 JHU-06 Endothelial Cell None H3K4me2 [Search on ENCODE]
GSM2151910 None Fibroblast Skin H3K27ac [Search on ENCODE]
GSM1914994 LM7 Osteosarcoma cell None H3K4me1 [Search on ENCODE]
GSM2359998 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM2977510 BJ Fibroblast Skin H3K27ac [Search on ENCODE]
GSM2865070 None None Retina H3K4me1 [Search on ENCODE]
GSM2550254 None Fibroblast None H3K27ac [Search on ENCODE]
GSM875813 LNCaP Epithelium Prostate H3K36me3 [Search on ENCODE]
GSM875814 LNCaP Epithelium Prostate H3K36me3 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.