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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 150621510-150621511 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM1233869 GM10847 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233870 GM10847 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233885 GM10847 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233886 GM10847 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233887 GM12878 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM1233888 GM12878 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM1233911 GM12878 B Lymphocyte Blood STAG1 [Search on ENCODE]
GSM1233912 GM12878 B Lymphocyte Blood STAG1 [Search on ENCODE]
GSM1233913 GM12878 B Lymphocyte Blood STAG1 [Search on ENCODE]
GSM1233914 GM12890 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233915 GM12890 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233916 GM12890 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233931 GM12890 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233932 GM12890 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233933 GM12891 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233934 GM12891 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233953 GM12891 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233954 GM12891 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233955 GM12892 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233956 GM12892 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233975 GM12892 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233976 GM12892 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233977 GM18486 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233978 GM18486 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233979 GM18486 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233991 GM18486 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233992 GM18486 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233993 GM18505 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233994 GM18505 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234009 GM18505 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234010 GM18526 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234011 GM18526 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234025 GM18526 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234026 GM18526 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234027 GM18951 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234028 GM18951 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234042 GM18951 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234043 GM18951 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234044 GM19099 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234045 GM19099 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234059 GM19099 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234060 GM19099 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234061 GM19193 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234062 GM19193 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234076 GM19193 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234077 GM19193 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234078 GM19238 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234079 GM19238 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234097 GM19238 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234098 GM19238 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234099 GM19239 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234100 GM19239 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234119 GM19239 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234120 GM19239 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234121 GM19240 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234122 GM19240 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234142 GM19240 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234143 GM19240 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234144 GM2255 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234145 GM2255 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234146 GM2255 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234160 GM2255 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234161 GM2255 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234162 GM2588 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234163 GM2588 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234164 GM2588 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234178 GM2588 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234179 GM2588 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234180 GM2610 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234181 GM2610 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234182 GM2610 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234196 GM2610 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234197 GM2610 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234198 GM2630 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234199 GM2630 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234200 GM2630 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234214 GM2630 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234215 GM2630 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234216 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234217 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234218 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234219 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234237 MS1 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234238 MS1 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1505621 HUES64 Embryonic Stem Cell Embryo CTCF [Search on ENCODE]
GSM1684571 PANC-1 None Pancreas CTCF [Search on ENCODE]
GSM1684572 PANC-1 None Pancreas CTCF [Search on ENCODE]
GSM1684573 PANC-1 None Pancreas CTCF [Search on ENCODE]
GSM1684574 PANC-1 None Pancreas CTCF [Search on ENCODE]
ENCSR102CSD_1 None None Colon CTCF [Search on ENCODE]
ENCSR146BGM_1 None None gastroesophageal sphincter CTCF [Search on ENCODE]
ENCSR206ETG_1 None None gastroesophageal sphincter CTCF [Search on ENCODE]
ENCSR234HEM_1 None None Spleen CTCF [Search on ENCODE]
ENCSR304XUZ_1 None None Breast CTCF [Search on ENCODE]
ENCSR341VKC_1 None None Sigmoid Colon CTCF [Search on ENCODE]
ENCSR482PMN_1 None None Spleen CTCF [Search on ENCODE]
ENCSR661NXJ_1 None None Breast CTCF [Search on ENCODE]
ENCSR692ILH_1 None None Spleen CTCF [Search on ENCODE]
ENCSR769WKR_1 None None Colon CTCF [Search on ENCODE]
ENCSR833FWC_1 None None Colon CTCF [Search on ENCODE]
ENCSR835XKS_1 GM12878 B Lymphocyte Blood TRIM22 [Search on ENCODE]
ENCSR835XKS_2 GM12878 B Lymphocyte Blood TRIM22 [Search on ENCODE]
GSM2178296 COLO-829 None None CTCF [Search on ENCODE]
GSM2544247 THP-1 Macrophage None CTCF [Search on ENCODE]
GSM2544246 THP-1 Macrophage None CTCF [Search on ENCODE]
GSM2544245 THP-1 Monocyte None CTCF [Search on ENCODE]
GSM2544244 THP-1 Monocyte None CTCF [Search on ENCODE]
GSM2316304 None None Retina CTCF [Search on ENCODE]
GSM2493878 HAP-1 Embryonic Stem Cell Embryo CTCF [Search on ENCODE]
GSM2214117 Rh4 rhabdomyosarcoma None RAD21 [Search on ENCODE]
GSM2214100 Rh4 rhabdomyosarcoma None CTCF [Search on ENCODE]
GSM2214099 Rh4 rhabdomyosarcoma None CTCF [Search on ENCODE]
GSM2040769 ID00015 Lymphoblastoid None CTCF [Search on ENCODE]
GSM2040765 GM12878 Lymphoblastoid None CTCF [Search on ENCODE]
GSM2040767 GM17942 Lymphoblastoid None CTCF [Search on ENCODE]
GSM2572338 SHEP-21N Neuroblastoma cell Bone Marrow CTCF [Search on ENCODE]
GSM2443456 LCL B Lymphocyte None SMC1A [Search on ENCODE]
GSM2443455 LCL B Lymphocyte None SMC1A [Search on ENCODE]
GSM2809615 HCT-116 None Colon CTCF [Search on ENCODE]
GSM2809614 HCT-116 None Colon CTCF [Search on ENCODE]
GSM2040770 ID00016 Lymphoblastoid None CTCF [Search on ENCODE]
GSM2877990 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
GSM2877993 MCF-7 Epithelium Breast CTCF [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.