Home
Virus
Gene
Disease
Dataset
Download
Help
 
HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 12356629-12356630 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM759666 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM772738 None Neuron None H3K9me3 [Search on ENCODE]
GSM986080 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
GSM986078 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
GSM958159 None Keratinocyte Foreskin H3K36me3 [Search on ENCODE]
GSM969568 LNCaP-abl Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM910571 None None Spleen H3K36me3 [Search on ENCODE]
GSM646361 HepG2 Epithelium Liver H3K4me1 [Search on ENCODE]
GSM1120348 None None Spleen H3K36me3 [Search on ENCODE]
GSM916058 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112787 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112797 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112809 None Epithelium Liver H3K27ac [Search on ENCODE]
GSM1112792 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112794 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112793 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112798 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM621422 None Mesenchymal Stem Cell Bone Marrow H3K4me3 [Search on ENCODE]
GSM1160196 None None Fetal Adrenal Gland H3K36me3 [Search on ENCODE]
GSM1018046 A549 Epithelium Lung H3K9ac [Search on ENCODE]
GSM621442 None Mesenchymal Stem Cell Bone Marrow H3K9ac [Search on ENCODE]
GSM1055821 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1177768 U2OS None Bone H3K36me3 [Search on ENCODE]
GSM1233943 GM12891 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1249447 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1249448 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1261674 None None Pancreatic Islet H3K27ac [Search on ENCODE]
GSM1314124 KOPT-K1 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1314145 DND-41 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1003496 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM1003493 A549 Epithelium Lung H3K27ac [Search on ENCODE]
GSM1003544 A549 Epithelium Lung H3K9ac [Search on ENCODE]
GSM945244 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1003578 A549 Epithelium Lung H3K27ac [Search on ENCODE]
GSM1003542 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1003463 DND-41 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM945324 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM798321 HepG2 Epithelium Liver H3K4me1 [Search on ENCODE]
GSM733743 HepG2 Epithelium Liver H3K27ac [Search on ENCODE]
GSM1003562 None Monocyte Blood H3K36me3 [Search on ENCODE]
GSM1003534 None Astrocyte Brain H3K9ac [Search on ENCODE]
GSM1003533 None Astrocyte Brain H3K4me2 [Search on ENCODE]
GSM733779 None Osteoblast Bone H3K4me2 [Search on ENCODE]
GSM733739 None Osteoblast Bone H3K27ac [Search on ENCODE]
GSM1663035 IOE11 Epithelium Ovary H3K27ac [Search on ENCODE]
GSM1663036 IOE11 Epithelium Ovary H3K27ac [Search on ENCODE]
GSM1670897 HepG2 Epithelium Liver H3K27ac [Search on ENCODE]
GSM1918499 K562 Erythroblast Bone Marrow H3 [Search on ENCODE]
GSM1922388 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1679102 LNCaP-abl Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1862993 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1915113 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1915114 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM2098177 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1902615 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2066435 HCC1954 Epithelium Mammary Gland H3K27ac [Search on ENCODE]
ENCSR016PSC_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR016PSC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR016PSC_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR102XUM_1 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR102XUM_2 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR102XUM_3 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR124YCC_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124YCC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR180YHA_1 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR180YHA_2 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR215DID_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR242TBH_1 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR242TBH_2 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR275NCH_2 PC-3 Epithelium Prostate H3K4me3 [Search on ENCODE]
ENCSR340NAL_1 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR340NAL_3 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR350EFV_2 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR350EFV_3 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR410BCN_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR435JKM_2 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR493NBY_2 MCF-7 Epithelium Breast H3K4me1 [Search on ENCODE]
ENCSR520BIM_1 None None Pancreas H3K27ac [Search on ENCODE]
ENCSR520BIM_2 None None Pancreas H3K27ac [Search on ENCODE]
ENCSR543ZVZ_1 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR543ZVZ_2 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR555EAA_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR555EAA_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR555EAA_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR564IGJ_1 SK-N-SH Neuroblastoma cell Brain H3K27ac [Search on ENCODE]
ENCSR564IGJ_2 SK-N-SH Neuroblastoma cell Brain H3K27ac [Search on ENCODE]
ENCSR566UMF_1 PC-3 Epithelium Prostate H3K4me1 [Search on ENCODE]
ENCSR569IBY_1 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR569IBY_3 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR596PFU_1 None None Pancreas H3K27ac [Search on ENCODE]
ENCSR614NPG_2 A549 Epithelium Lung H3K27ac [Search on ENCODE]
GSM753432 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
ENCSR692JHM_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR692JHM_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR752UOD_1 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
ENCSR766NHB_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR766NHB_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR783SNV_2 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR783SNV_3 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR826UTD_1 PC-3 Epithelium Prostate H3K27ac [Search on ENCODE]
ENCSR826UTD_2 PC-3 Epithelium Prostate H3K27ac [Search on ENCODE]
ENCSR905REY_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR905REY_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR918VQU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR918VQU_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR930HLX_2 None None Aorta H3K4me3 [Search on ENCODE]
GSM2080914 C4-2B Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2421998 None None meningioma H3K27ac [Search on ENCODE]
GSM2421994 None None meningioma H3K27ac [Search on ENCODE]
GSM2058052 V9P Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2360941 Huh7 Epithelium Liver H3K27ac [Search on ENCODE]
GSM2360940 Huh7 Epithelium Liver H3K27ac [Search on ENCODE]
GSM2360939 Huh7 Epithelium Liver H3K27ac [Search on ENCODE]
GSM2406912 A549 Epithelium Lung H3K27ac [Search on ENCODE]
GSM2406907 A549 Epithelium Lung H3K27ac [Search on ENCODE]
GSM1907214 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1907213 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1574289 CFPAC-1 None None H3K4me1 [Search on ENCODE]
GSM1574288 CFPAC-1 None None H3K4me1 [Search on ENCODE]
GSM1574254 PT45-P1 None Pancreatic ductal H3K4me1 [Search on ENCODE]
GSM1868869 C4-2B Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1868868 C4-2B Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1876038 None Smooth Muscle Cell Coronary artery smooth muscle H3K27ac [Search on ENCODE]
GSM2058766 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2058760 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2058753 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2058752 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2228905 None Keratinocyte Foreskin H3K36me3 [Search on ENCODE]
GSM2357616 None Ewing sacroma None H3K4me1 [Search on ENCODE]
GSM2265642 SF8628 None Pontine H3K4me1 [Search on ENCODE]
GSM2058092 None None primary colorectal cancer tumor H3K4me1 [Search on ENCODE]
GSM2360952 Huh7 Epithelium Liver H4K5ac [Search on ENCODE]
GSM2360950 Huh7 Epithelium Liver H3K9ac [Search on ENCODE]
GSM2360949 Huh7 Epithelium Liver H3K9ac [Search on ENCODE]
GSM2360944 Huh7 Epithelium Liver H3K36ac [Search on ENCODE]
GSM2360943 Huh7 Epithelium Liver H3K36ac [Search on ENCODE]
GSM2360942 Huh7 None None H3K36ac [Search on ENCODE]
GSM1907210 LNCaP Epithelium Prostate H3K4me1 [Search on ENCODE]
GSM1907209 LNCaP Epithelium Prostate H3K4me1 [Search on ENCODE]
GSM2258740 ZR-75-1 None Breast H3K27ac [Search on ENCODE]
GSM2258746 ZR-75-1 None Breast H3K4me1 [Search on ENCODE]
GSM2753394 None Hepatocyte None H3K27ac [Search on ENCODE]
GSM2258766 MB361 None Breast H3K4me3 [Search on ENCODE]
GSM2258765 MB361 None Breast H3K4me1 [Search on ENCODE]
GSM2258764 MB361 None Breast H3K4me1 [Search on ENCODE]
GSM2644048 D1 ORL UVA Hepatocyte None H3K4me1 [Search on ENCODE]
GSM772972 None Smooth Muscle Cell Colon H3K4me1 [Search on ENCODE]
GSM2359488 A549 Epithelium Lung H3K27ac [Search on ENCODE]
GSM2359489 H3122 None Lung H3K27ac [Search on ENCODE]
GSM773042 None Haematopoietic Progenitor Cell Cord blood H3K36me3 [Search on ENCODE]
GSM2277154 LNCaP Epithelium Prostate H3K4me1 [Search on ENCODE]
GSM2258758 MB361 None Breast H3K27ac [Search on ENCODE]
GSM2258691 76NF2V None Breast H3K36me3 [Search on ENCODE]
GSM2644050 D1 ORL UVA Hepatocyte None H3K27ac [Search on ENCODE]
GSM2644053 None Hepatocyte None H3K27ac [Search on ENCODE]
GSM2644056 None Hepatocyte None H3K27ac [Search on ENCODE]
GSM2550198 None Endothelial Cell None H3K27ac [Search on ENCODE]
GSM2723838 A-498 None None H3K27ac [Search on ENCODE]
GSM2359494 A549 Epithelium Lung H3K27ac [Search on ENCODE]
GSM2301919 RPM-MC Epithelium None H3K4me3 [Search on ENCODE]
GSM2550257 None Fibroblast None H3K4me3 [Search on ENCODE]
GSM2550254 None Fibroblast None H3K27ac [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.