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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 12356629-12356630 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM530666 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM530665 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM468801 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM468792 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM701538 None None Fetal Stomach DNase [Search on ENCODE]
GSM701536 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM701533 None None Fetal Muscle Trunk DNase [Search on ENCODE]
GSM701532 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM701523 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM701522 None Epithelium Upper Limb Muscle DNase [Search on ENCODE]
GSM701521 None None Fetal Stomach DNase [Search on ENCODE]
GSM701520 None None Fetal Renal Pelvis Left DNase [Search on ENCODE]
GSM701519 None Cortex Fetal Kidney Left DNase [Search on ENCODE]
GSM701515 None Epithelium Kidney DNase [Search on ENCODE]
GSM701512 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM701511 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM701510 None None Fetal Renal Pelvis DNase [Search on ENCODE]
GSM701506 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM701505 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM701502 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM701494 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM665834 None Epithelium Kidney DNase [Search on ENCODE]
GSM665833 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM665821 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM665816 None Epithelium Kidney DNase [Search on ENCODE]
GSM665810 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM595927 None Epithelium Lung DNase [Search on ENCODE]
GSM595925 None Epithelium Lung DNase [Search on ENCODE]
GSM595916 None Epithelium Lung DNase [Search on ENCODE]
GSM595915 None Epithelium Lung DNase [Search on ENCODE]
GSM530655 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM493385 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM1024607 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM1024608 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM817212 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM817211 None Cortex Fetal Kidney Left DNase [Search on ENCODE]
GSM817217 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM817200 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM817216 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM817218 None Epithelium Fetal Renal Pelvis DNase [Search on ENCODE]
GSM817208 None Epithelium Fetal Renal Pelvis Right DNase [Search on ENCODE]
GSM817206 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM817204 None Epithelium Fetal Renal Pelvis Right DNase [Search on ENCODE]
GSM817209 None Epithelium Fetal Renal Pelvis Left DNase [Search on ENCODE]
GSM817202 None Cortex Fetal Kidney Right DNase [Search on ENCODE]
GSM817213 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM817210 None Cortex Fetal Kidney Right DNase [Search on ENCODE]
GSM1059531 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM1059534 None None Fetal Muscle Trunk DNase [Search on ENCODE]
GSM1059533 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM1059532 None None Fetal Stomach DNase [Search on ENCODE]
GSM1102740 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM878620 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM878644 None None Fetal Skin Biceps Left DNase [Search on ENCODE]
GSM878660 None None Fetal Stomach DNase [Search on ENCODE]
GSM878626 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM878622 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM878619 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM878653 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM878637 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM878655 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM878611 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM878662 None Epithelium Fetal Renal Pelvis DNase [Search on ENCODE]
GSM878631 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM878629 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM878632 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM878665 None None Fetal Stomach DNase [Search on ENCODE]
GSM878654 None None Fetal Muscle Trunk DNase [Search on ENCODE]
GSM878667 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM878630 None Epithelium Fetal Heart DNase [Search on ENCODE]
GSM878638 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM878666 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM1027330 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM1027342 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM1027315 None Epithelium Fetal Renal Pelvis DNase [Search on ENCODE]
GSM1027333 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM1027323 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM1027347 None Epithelium Fetal Kidney Left DNase [Search on ENCODE]
GSM1027349 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM1027317 None Epithelium Fetal Renal Pelvis DNase [Search on ENCODE]
GSM1027341 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM1027314 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM1027329 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM1027338 None Epithelium Fetal Kidney Left DNase [Search on ENCODE]
GSM1027340 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM1027336 None Epithelium Fetal Kidney Left DNase [Search on ENCODE]
GSM1027316 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM1027337 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM817190 None Cortex Fetal Kidney Left DNase [Search on ENCODE]
GSM817192 None Epithelium Fetal Renal Pelvis Right DNase [Search on ENCODE]
GSM817182 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM817171 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM817177 None Epithelium Fetal Renal Pelvis DNase [Search on ENCODE]
GSM817178 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM817191 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM817158 None None Fetal Skin DNase [Search on ENCODE]
GSM1014512 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM1014508 HA-sp Astrocyte Spinal Cord DNase [Search on ENCODE]
GSM1014520 None Epithelium None DNase [Search on ENCODE]
GSM1014534 HGF Fibroblast Gingiva DNase [Search on ENCODE]
GSM723023 None Epithelium Fetal Heart DNase [Search on ENCODE]
GSM723024 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM774227 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM774224 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM774211 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM774223 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM774242 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM774218 None None Fetal Muscle Upper Trunk DNase [Search on ENCODE]
GSM774231 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM774226 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM774234 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM774235 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM774233 None Epithelium Fetal Large Intestine DNase [Search on ENCODE]
GSM774237 None Epithelium Fetal Lung Left DNase [Search on ENCODE]
GSM774239 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM849029 None Fibroblast Umbilical Vein DNase [Search on ENCODE]
GSM849026 None Astrocyte Brain DNase [Search on ENCODE]
GSM849028 None Fibroblast Lung DNase [Search on ENCODE]
GSM1220603 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM1220608 None None Fetal Skin Upper Back DNase [Search on ENCODE]
GSM1255275 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1338307 None Fibroblast None DNase [Search on ENCODE]
GSM1338308 None Fibroblast None DNase [Search on ENCODE]
GSM1338309 None Fibroblast None DNase [Search on ENCODE]
GSM1338310 None Fibroblast None DNase [Search on ENCODE]
GSM736518 BJ Fibroblast Skin DNase [Search on ENCODE]
GSM736547 None Fibroblast Eye DNase [Search on ENCODE]
GSM736576 HGF Fibroblast Gingiva DNase [Search on ENCODE]
GSM736579 HGF Fibroblast Gingiva DNase [Search on ENCODE]
GSM736528 None Fibroblast Periodontal Ligament DNase [Search on ENCODE]
GSM736632 None Fibroblast Periodontal Ligament DNase [Search on ENCODE]
GSM736503 None Fibroblast Lung DNase [Search on ENCODE]
GSM736565 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM736603 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM736544 None Astrocyte Brain DNase [Search on ENCODE]
GSM736498 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM736546 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM736612 NHLF Fibroblast Lung DNase [Search on ENCODE]
GSM736536 NHLF Fibroblast Lung DNase [Search on ENCODE]
GSM763534 BJ Fibroblast Skin DNase [Search on ENCODE]
ENCSR083STA_1 MG-63 Fibroblast Bone DNase [Search on ENCODE]
ENCSR083STA_2 MG-63 Fibroblast Bone DNase [Search on ENCODE]
ENCSR782XFY_1 None None Eye DNase [Search on ENCODE]
ENCSR782XFY_2 None None Eye DNase [Search on ENCODE]
ENCSR759UNY_1 None None Tongue DNase [Search on ENCODE]
ENCSR759UNY_2 None None Tongue DNase [Search on ENCODE]
ENCSR346IHH_1 Daoy Polygonal Cerebellum DNase [Search on ENCODE]
ENCSR346IHH_2 Daoy Polygonal Cerebellum DNase [Search on ENCODE]
ENCSR364MFN_1 None Hepatocyte None DNase [Search on ENCODE]
ENCSR405TXU_1 None Adipocyte None DNase [Search on ENCODE]
ENCSR512CWR None None Umbilical Cord DNase [Search on ENCODE]
ENCSR559WMK None None Tongue DNase [Search on ENCODE]
ENCSR705CNJ_2 None None Heart DNase [Search on ENCODE]
ENCSR813CKU None None Urinary Bladder DNase [Search on ENCODE]
ENCSR000FFJ SJCRH30 Fibroblast Muscle DNase [Search on ENCODE]
ENCSR435NHO_2 None None embryonic facial prominence DNase [Search on ENCODE]
ENCSR532CRI_2 None None Limb DNase [Search on ENCODE]
ENCSR664PKM_1 None None Heart DNase [Search on ENCODE]
ENCSR749BWV_1 None None Heart DNase [Search on ENCODE]
ENCSR768OLL_1 None None Kidney DNase [Search on ENCODE]
ENCSR818JGZ_1 None None Limb DNase [Search on ENCODE]
ENCSR818JGZ_2 None None Limb DNase [Search on ENCODE]
ENCSR820WLP_1 None Stem cell None DNase [Search on ENCODE]
ENCSR820WLP_2 None Stem cell None DNase [Search on ENCODE]
GSM2241149 T47D Epithelium Mammary Gland ATAC-seq [Search on ENCODE]
GSM2241148 T47D Epithelium Mammary Gland ATAC-seq [Search on ENCODE]
GSM816634 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1876030 None None Artery ATAC-seq [Search on ENCODE]
GSM1876031 None None Artery ATAC-seq [Search on ENCODE]
GSM2214118 RH5 rhabdomyosarcoma None DNase [Search on ENCODE]
GSM1876025 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876024 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876027 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876026 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876021 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876023 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876022 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876028 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM2214102 Rh4 rhabdomyosarcoma None DNase [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.