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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 155695170-155695171 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM925735 MCF7-LTED Epithelium Mammary Gland FAIRE [Search on ENCODE]
GSM925736 MCF7-LTED Epithelium Mammary Gland FAIRE [Search on ENCODE]
GSM986065 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM986066 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM986088 MCF-7 Epithelium Breast EP300 [Search on ENCODE]
GSM1125983 None Epithelium Bronchia GRHL2 [Search on ENCODE]
GSM1125982 None Epithelium Bronchia GRHL2 [Search on ENCODE]
GSM1125984 None Epithelium Bronchia GRHL2 [Search on ENCODE]
GSM989640 LNCaP Epithelium Prostate NKX3-1 [Search on ENCODE]
GSM980665 LNCaP Epithelium Prostate NR3C1 [Search on ENCODE]
GSM1038278 MM1.S B Lymphocyte Blood POLR2A [Search on ENCODE]
GSM1038273 MM1.S B Lymphocyte Blood BRD4 [Search on ENCODE]
GSM1234099 GM19239 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234121 GM19240 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234122 GM19240 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234199 GM2630 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1257396 None Stromal Cell None NR2F2 [Search on ENCODE]
GSM817347 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM817349 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM817353 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM817354 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1328945 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1328952 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1328957 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1328958 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1328960 VCaP Epithelium Prostate BRD4 [Search on ENCODE]
GSM1328978 VCaP Epithelium Prostate ERG [Search on ENCODE]
GSM1328979 VCaP Epithelium Prostate ERG [Search on ENCODE]
GSM1328980 VCaP Epithelium Prostate ERG [Search on ENCODE]
GSM1328981 VCaP Epithelium Prostate ERG [Search on ENCODE]
GSM935441 MCF-10A Epithelium Breast MYC [Search on ENCODE]
GSM1010863 MCF-7 Epithelium Breast MAX [Search on ENCODE]
GSM803522 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1122671 HCC2157 Epithelium Mammary Gland KDM5B [Search on ENCODE]
GSM1164145 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1164146 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1164147 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1164148 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1193657 VCaP Epithelium Prostate ERG [Search on ENCODE]
GSM1462475 T47D Epithelium Mammary Gland HIF1A [Search on ENCODE]
GSM1068136 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1068137 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1071280 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1236922 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1354836 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1354837 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1354838 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1354839 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1489926 VCaP Epithelium Prostate ASH2L [Search on ENCODE]
GSM1489927 VCaP Epithelium Prostate ASH2L [Search on ENCODE]
GSM1494446 HeLa Epithelium Cervix CDK9 [Search on ENCODE]
GSM1494447 HeLa Epithelium Cervix CDK9 [Search on ENCODE]
GSM838400 C4-2B Epithelium Prostate RUNX2 [Search on ENCODE]
GSM1576449 LNCaP Epithelium Prostate VDR [Search on ENCODE]
GSM1622625 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1622629 VCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM1777599 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777601 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777604 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777605 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777606 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777609 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777610 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1358411 None None Prostate AR [Search on ENCODE]
GSM1527034 CWR22Pc Epithelium Prostate AR [Search on ENCODE]
GSM1716764 LNCaP Epithelium Prostate HOXB13 [Search on ENCODE]
GSM801011 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1645711 None Keratinocyte None BANF1 [Search on ENCODE]
ENCSR402IDP_1 MM.1S B Lymphoblast Blood CTCF [Search on ENCODE]
ENCSR402IDP_2 MM.1S B Lymphoblast Blood CTCF [Search on ENCODE]
GSM631471 MCF-7 Epithelium Breast FOXA1 [Search on ENCODE]
GSM1873046 LNCaP Epithelium Prostate CREB1 [Search on ENCODE]
GSM1873045 LNCaP Epithelium Prostate CREB1 [Search on ENCODE]
GSM1873044 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1873043 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1873041 LNCaP Epithelium Prostate CREB1 [Search on ENCODE]
GSM1873039 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1538431 LNCaP Epithelium Prostate CREB1 [Search on ENCODE]
GSM1538429 LNCaP Epithelium Prostate CREB1 [Search on ENCODE]
GSM1825677 OVCA429 None None GRHL2 [Search on ENCODE]
GSM1586659 C4-2 None Prostate AR [Search on ENCODE]
GSM1863005 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2302869 MM1.S B Lymphocyte Blood HDAC1 [Search on ENCODE]
GSM2186464 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM2219875 LNCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM2219874 LNCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM2219872 LNCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM2219866 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219864 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219861 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219851 LNCaP Epithelium Prostate RELA [Search on ENCODE]
GSM2219850 LNCaP Epithelium Prostate RELA [Search on ENCODE]
GSM2171836 MCF-7 asynchonous cells Breast GRHL2 [Search on ENCODE]
GSM2171835 MCF-7 asynchonous cells Breast GRHL2 [Search on ENCODE]
GSM2171834 MCF-7 asynchonous cells Breast GRHL2 [Search on ENCODE]
GSM2154993 MCF-7 None Breast NR3C1 [Search on ENCODE]
GSM2154989 MCF-7 None Breast NR3C1 [Search on ENCODE]
GSM2122803 LNCaP Epithelium Prostate GRHL2 [Search on ENCODE]
GSM2122802 LNCaP Epithelium Prostate GRHL2 [Search on ENCODE]
GSM2410317 SK-N-SH Neuroblastoma cell Brain EBF3 [Search on ENCODE]
GSM2401446 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401447 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2977504 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2537229 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537225 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537226 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537227 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2278004 HCC70 Epithelium Breast STAT3 [Search on ENCODE]
GSM2278005 HCC70 Epithelium Breast STAT3 [Search on ENCODE]
GSM2970415 MCF-7 Epithelium Breast GRHL2 [Search on ENCODE]
GSM717395 VCaP Epithelium Prostate ERG [Search on ENCODE]
GSM2278009 MDA-MB-468 mDA None STAT3 [Search on ENCODE]
GSM2977490 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2970416 MCF-7 Epithelium Breast GRHL2 [Search on ENCODE]
GSM2970417 MCF-7 Epithelium Breast GRHL2 [Search on ENCODE]
GSM2970414 MCF-7 Epithelium Breast GRHL2 [Search on ENCODE]
GSM2970418 MCF-7 Epithelium Breast GRHL2 [Search on ENCODE]
GSM2970419 MCF-7 Epithelium Breast GRHL2 [Search on ENCODE]
GSM2977503 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2537233 VCaP Epithelium Prostate HOXB13 [Search on ENCODE]
GSM2537232 VCaP Epithelium Prostate HOXB13 [Search on ENCODE]
GSM2537231 VCaP Epithelium Prostate HOXB13 [Search on ENCODE]
GSM2537230 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537235 VCaP Epithelium Prostate HOXB13 [Search on ENCODE]
GSM2537234 VCaP Epithelium Prostate HOXB13 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.