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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 155695170-155695171 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM701536 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM701522 None Epithelium Upper Limb Muscle DNase [Search on ENCODE]
GSM701506 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM701505 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM817217 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM817200 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM817216 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM817214 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM817213 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM1059531 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM1059534 None None Fetal Muscle Trunk DNase [Search on ENCODE]
GSM1059533 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM646564 None Fibroblast Skin DNase [Search on ENCODE]
GSM646561 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM878626 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM878653 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM878611 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM878632 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM878654 None None Fetal Muscle Trunk DNase [Search on ENCODE]
GSM1027330 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM1027335 None None Pancreas DNase [Search on ENCODE]
GSM1027333 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM1027349 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM1027320 None None Stomach DNase [Search on ENCODE]
GSM817182 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM817179 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM817171 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM817191 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM1014512 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM1014529 None Endothelial Cell Blood DNase [Search on ENCODE]
GSM1014511 None Epithelium Esophagus DNase [Search on ENCODE]
GSM1014527 AG10803 Fibroblast Skin DNase [Search on ENCODE]
GSM1014530 None Fibroblast Heart DNase [Search on ENCODE]
GSM1014536 T47D Epithelium Mammary Gland DNase [Search on ENCODE]
GSM1014534 HGF Fibroblast Gingiva DNase [Search on ENCODE]
GSM774242 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM774234 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM774235 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM849029 None Fibroblast Umbilical Vein DNase [Search on ENCODE]
GSM849025 None Epithelium Lung DNase [Search on ENCODE]
GSM1255262 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255267 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255268 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255269 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255270 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255272 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255277 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255278 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255279 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255283 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM736579 HGF Fibroblast Gingiva DNase [Search on ENCODE]
GSM736599 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736591 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736507 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736627 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736565 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM736603 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM736581 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM736588 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM1024764 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM1024767 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM1024784 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM1024783 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM736520 NHDF-Ad Fibroblast Skin DNase [Search on ENCODE]
GSM736567 NHDF-Ad Fibroblast Skin DNase [Search on ENCODE]
GSM736498 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM736546 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM1024761 T47D Epithelium Mammary Gland DNase [Search on ENCODE]
GSM1024762 T47D Epithelium Mammary Gland DNase [Search on ENCODE]
GSM763533 HeLa Epithelium Cervix DNase [Search on ENCODE]
ENCSR759UNY_1 None None Tongue DNase [Search on ENCODE]
GSM816637 LNCaP Epithelium Prostate DNase [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.