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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 26123511-26123512 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM621752 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM621741 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM621745 None Satellite Cells Muscle H3K4me3 [Search on ENCODE]
GSM521897 IMR90 Fibroblast Lung H3K4me1 [Search on ENCODE]
GSM894071 U87 None Brain H3K4me3 [Search on ENCODE]
GSM958155 None Keratinocyte Foreskin H3K4me3 [Search on ENCODE]
GSM1125769 None Epithelium Fetal Large Intestine H3K36me3 [Search on ENCODE]
GSM646465 NHEK Keratinocyte Skin H3K4me2 [Search on ENCODE]
GSM646456 NHEK Keratinocyte Skin H3K27ac [Search on ENCODE]
GSM646457 NHEK Keratinocyte Skin H3K27ac [Search on ENCODE]
GSM646382 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM669911 None Mesenchymal Stem Cell Bone Marrow H3K4me1 [Search on ENCODE]
GSM646383 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM646374 None Epithelium Mammary Gland H3K27ac [Search on ENCODE]
GSM646384 None Epithelium Mammary Gland H3K4me3 [Search on ENCODE]
GSM621402 None Mesenchymal Stem Cell Bone Marrow H3K4me1 [Search on ENCODE]
GSM1038456 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1038444 A549 Epithelium Lung H3K27ac [Search on ENCODE]
GSM1018048 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1018054 A549 Epithelium Lung H3K9ac [Search on ENCODE]
GSM1233901 GM12878 B Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1233943 GM12891 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233965 GM12892 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234000 GM18505 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234016 GM18526 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234017 GM18526 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234033 GM18951 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234034 GM18951 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234067 GM19193 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234068 GM19193 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234086 GM19238 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234087 GM19238 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234108 GM19239 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234109 GM19239 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234131 GM19240 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234152 GM2255 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234170 GM2588 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234188 GM2610 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234206 GM2630 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1240113 HCT-116 None Colon H3K4me2 [Search on ENCODE]
GSM1264166 HeLa Epithelium Cervix H2A [Search on ENCODE]
GSM1303758 KYSE-150 Epitheloid Cell Esophagus H3K4me3 [Search on ENCODE]
GSM1314145 DND-41 T Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1003496 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM1003542 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM945315 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM945324 H7 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM945853 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM733734 HeLa-S3 Epithelium Cervix H3K4me2 [Search on ENCODE]
GSM733654 None Epithelium Mammary Gland H3K4me2 [Search on ENCODE]
GSM733660 None Epithelium Mammary Gland H3K27ac [Search on ENCODE]
GSM733712 None Epithelium Mammary Gland H3K4me3 [Search on ENCODE]
GSM945271 None Epithelium None H3K4me3 [Search on ENCODE]
GSM1003533 None Astrocyte Brain H3K4me2 [Search on ENCODE]
GSM733763 None Astrocyte Brain H3K27ac [Search on ENCODE]
GSM1003526 NHDF-Ad Fibroblast Skin H3K4me1 [Search on ENCODE]
GSM733674 NHEK Keratinocyte Skin H3K27ac [Search on ENCODE]
GSM733686 NHEK Keratinocyte Skin H3K4me2 [Search on ENCODE]
GSM733779 None Osteoblast Bone H3K4me2 [Search on ENCODE]
GSM945199 SAEC Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1252276 None None Stomach H3K36me3 [Search on ENCODE]
GSM1252280 None None Stomach H3K36me3 [Search on ENCODE]
GSM1435528 None Fibroblast None H3K4me1 [Search on ENCODE]
GSM1526934 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1526935 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1446922 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1421319 None Epithelium Breast H3K4me3 [Search on ENCODE]
GSM1663107 HT1080 None Connective Tissue H3K27ac [Search on ENCODE]
GSM1663108 HT1080 None Connective Tissue H3K27ac [Search on ENCODE]
GSM1853822 HEK293 Epithelium Embryonic Kidney H3K4me3 [Search on ENCODE]
GSM1866090 None None Brain H3K27ac [Search on ENCODE]
GSM1866094 None None Brain H3K27ac [Search on ENCODE]
GSM1918521 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918535 K562 Erythroblast Bone Marrow H3K4me3 [Search on ENCODE]
GSM1918560 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM1918561 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM1645724 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1890730 HCT-116 None Colon H3K27ac [Search on ENCODE]
ENCSR007YOT_2 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR016PSC_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR016PSC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR016PSC_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124MTJ_2 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR124YCC_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124YCC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR139DGM_1 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
ENCSR215DID_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR555EAA_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR564IGJ_2 SK-N-SH Neuroblastoma cell Brain H3K27ac [Search on ENCODE]
ENCSR692JHM_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR692JHM_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR766NHB_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR766NHB_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR766NHB_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR834LCU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR901AAW_1 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
ENCSR905REY_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR905REY_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR906NGD_1 None Fibroblast None H3K4me1 [Search on ENCODE]
ENCSR906NGD_2 None Fibroblast None H3K4me1 [Search on ENCODE]
ENCSR918VQU_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM772745 None Mesenchymal Stem Cell Adipose H3K4me1 [Search on ENCODE]
GSM2265672 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM2265670 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM1422981 None Melanocytic cell None H3K27ac [Search on ENCODE]
GSM1666384 NHEK Keratinocyte Skin H3K4me3 [Search on ENCODE]
GSM2029590 ZR-75-30 None None H3K4me3 [Search on ENCODE]
GSM2187264 DU145 Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM2187257 DU145 Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM2187255 DU145 Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM2187253 DU145 Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM2187240 DU145 Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM2175578 HCT-116 Human colorectal tumor None H3K4me2 [Search on ENCODE]
GSM2175577 HCT-116 Human colorectal tumor None H3K4me2 [Search on ENCODE]
GSM2175562 HCT-116 Human colorectal tumor None H3K4me2 [Search on ENCODE]
GSM2175561 HCT-116 Human colorectal tumor None H3K4me2 [Search on ENCODE]
GSM1607403 None Stem cell Foreskin H3K4me3 [Search on ENCODE]
GSM1607402 None Stem cell Foreskin H3K4me3 [Search on ENCODE]
GSM1607401 None Stem cell Foreskin H3K4me3 [Search on ENCODE]
GSM1607397 None Keratinocyte Foreskin H3K4me3 [Search on ENCODE]
GSM1607388 None Stem cell Foreskin H3K4me3 [Search on ENCODE]
GSM1835880 G-401 None Kidney H3K4me3 [Search on ENCODE]
GSM1835875 G-401 None Kidney H3K4me3 [Search on ENCODE]
GSM2442786 None Endothelial Cell Umbilical Vein H3K4me2 [Search on ENCODE]
GSM1422990 None Melanocytic cell None H3K4me2 [Search on ENCODE]
GSM1422976 None Melanocytic cell None H2BK5ac [Search on ENCODE]
GSM2150374 H1299 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM2150350 H1299 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM2258911 HCC1937 None Breast H3K4me3 [Search on ENCODE]
GSM2667961 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2667960 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2816752 None Epithelium None H3K27ac [Search on ENCODE]
GSM2258875 MB436 None Breast H3K4me3 [Search on ENCODE]
GSM2711390 HCT-116 None HCT116 H3K4me2 [Search on ENCODE]
GSM2258874 MB436 None Breast H3K4me3 [Search on ENCODE]
GSM2712769 HCT-116 None HCT116 H3K4me2 [Search on ENCODE]
GSM2949414 MCF-10A Epithelium Breast H3K4me3 [Search on ENCODE]
GSM2301909 IMEC Epithelium Breast H3K4me3 [Search on ENCODE]
GSM2571029 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2550243 None Endothelial Cell None H3K4me3 [Search on ENCODE]
GSM2258866 MB436 None Breast H3K27ac [Search on ENCODE]
GSM2150382 H1299 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM2809619 HCT-116 None Colon H3K4me3 [Search on ENCODE]
GSM2258694 76NF2V None Breast H3K4me3 [Search on ENCODE]
GSM2667958 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2359992 None Mesenchymal Stem Cell Bone Marrow H3K4me3 [Search on ENCODE]
GSM2304703 HT1080 fibrosarcoma None H3K4me3 [Search on ENCODE]
GSM2064461 HeLa Epithelium Cervix H3K4me3 [Search on ENCODE]
GSM2496165 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496164 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496166 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496161 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496160 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496163 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496162 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2712758 HCT-116 None HCT116 H3K9ac [Search on ENCODE]
GSM2550198 None Endothelial Cell None H3K27ac [Search on ENCODE]
GSM2293321 None None Clear cell renal cell carcinoma tumor H3K4me1 [Search on ENCODE]
GSM2550254 None Fibroblast None H3K27ac [Search on ENCODE]
GSM2571031 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2571030 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.